Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZNF549Q6P9A3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZNF549Q6P9A3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZNF549Q6P9A3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 MRRFP1-201ENST00000435941 1675 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC007382.1-201ENST00000624376 2618 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 SNORD116-4-201ENST00000384733 96 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 RN7SKP278-201ENST00000410504 342 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 RN7SKP182-201ENST00000410772 298 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC098592.2-201ENST00000413158 265 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 MGAT2P2-201ENST00000427194 797 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 RPL34P6-201ENST00000432390 345 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 KCTD10P1-201ENST00000434203 625 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC093414.1-201ENST00000434712 514 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC069540.1-201ENST00000446320 988 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC026348.1-201ENST00000462549 1053 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AL591473.1-201ENST00000464297 313 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 SYT14P1-201ENST00000481459 721 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC109462.1-201ENST00000491087 368 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 TPT1P3-201ENST00000492841 512 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC021087.2-201ENST00000504656 1203 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC013701.1-201ENST00000522657 465 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC068993.1-201ENST00000546724 589 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AL049839.1-201ENST00000556151 657 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 Z82195.1-201ENST00000604558 398 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AP004372.1-201ENST00000604842 844 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC010424.2-201ENST00000607594 443 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC245100.7-201ENST00000609678 442 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AC022079.2-201ENST00000619739 566 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 AP001642.1-201ENST00000624727 2117 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 MTND5P11-201ENST00000511037 1812 ntBASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF549Q6P9A3 ZNF876P-202ENST00000398732 1485 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC107068.1-201ENST00000563286 4218 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 RN7SKP95-201ENST00000362860 303 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 RNU5B-1-201ENST00000363286 116 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 RNU4-68P-201ENST00000364314 141 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 RNU4-4P-201ENST00000364588 130 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 SNORA70-201ENST00000384436 135 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AP002784.2-201ENST00000397300 549 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 MIR1178-201ENST00000408396 91 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 DPPA2P3-201ENST00000411853 655 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL513175.2-201ENST00000422071 443 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL645608.4-201ENST00000423619 154 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms