Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 COX5BP7-201ENST00000414780 274 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 RPL7P44-201ENST00000424827 742 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 RPL7P23-201ENST00000493874 747 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 YPEL5P3-201ENST00000547227 352 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC090312.1-201ENST00000580637 348 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AP001642.1-201ENST00000624727 2117 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC016745.2-201ENST00000608834 3443 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 RNU2-65P-201ENST00000410162 185 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 RPL23AP81-201ENST00000455252 467 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 RN7SL271P-201ENST00000487601 295 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 AP005432.1-201ENST00000580891 3485 ntBASIC4.07□□□□□ -1.76
RIF1Q5UIP0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.07□□□□□ -1.76
RIF1Q5UIP0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 OR4F13P-201ENST00000428478 931 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC012158.1-204ENST00000483430 465 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AL391497.1-201ENST00000608671 547 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 RPL23AP57-201ENST00000332361 466 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 SNORA3.3-201ENST00000408712 125 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AL158156.1-201ENST00000422509 473 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AL590399.2-201ENST00000427536 309 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 MIR8058-201ENST00000615737 89 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RIF1Q5UIP0 MAPK10-328ENST00000641553 4009 ntBASIC4.06□□□□□ -1.76
RIF1Q5UIP0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AL590609.2-201ENST00000421430 368 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC104164.2-201ENST00000496953 495 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AL033523.1-201ENST00000605153 153 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AL442128.2-201ENST00000620246 1824 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms