Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC38Q502W7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC38Q502W7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL450326.2-201ENST00000421913 1962 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 MAPK10-349ENST00000641767 3661 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 RNU1-87P-201ENST00000363727 170 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 RN7SKP293-201ENST00000411389 296 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 RPL35AP24-201ENST00000413846 330 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL133325.1-201ENST00000421090 382 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 USP12PY-201ENST00000427677 1064 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 RPS26P40-201ENST00000435209 294 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 EEF1A1P1-201ENST00000447052 739 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 NAP1L1P3-201ENST00000462291 880 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC104689.1-201ENST00000473356 768 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 RN7SL214P-201ENST00000487317 265 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC113420.1-201ENST00000507903 571 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC118282.2-201ENST00000508739 374 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC107918.3-201ENST00000533272 382 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL132857.1-201ENST00000555180 708 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL008729.2-201ENST00000606393 473 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 RNU4-5P-201ENST00000607255 135 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 MIR6768-201ENST00000610734 72 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC234782.5-201ENST00000617723 324 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AC004232.3-201ENST00000622977 525 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AP003072.4-201ENST00000624580 310 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 AL049767.1-202ENST00000637826 242 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC38Q502W7 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.31□□□□□ -1.56
CCDC38Q502W7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC38Q502W7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 AP000542.2-201ENST00000623199 6179 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 ZNF29P-201ENST00000225587 168 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 RNU4-51P-201ENST00000364206 140 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 RNU6-146P-201ENST00000384602 108 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 MIR16-1-201ENST00000385271 89 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 RNU1-149P-201ENST00000390870 161 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 RNA5SP339-201ENST00000390987 122 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 SNORA68.2-201ENST00000391263 128 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 MTCO2P31-201ENST00000402702 684 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 RPL31P52-201ENST00000407532 367 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 CYCSP10-201ENST00000417973 294 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 GTF2IP2-201ENST00000424290 697 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 NANOGP5-201ENST00000424456 877 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms