Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 RNA5SP36-201ENST00000410197 133 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AL161631.1-201ENST00000417933 486 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AL158073.1-201ENST00000426848 1104 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 RN7SL604P-201ENST00000492589 296 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 PARP4P3-201ENST00000510265 317 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 OR8R1P-201ENST00000543943 764 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AC015922.4-201ENST00000612568 690 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AC138907.10-201ENST00000623708 983 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AC015813.6-201ENST00000624409 5808 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 TTC39DP-201ENST00000416781 1688 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AC083843.3-201ENST00000623679 2186 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 GSTM3P2-201ENST00000412746 530 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 COX6B1P7-201ENST00000430845 235 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 RPL36AP13-201ENST00000457490 317 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 MIR432-201ENST00000606207 94 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 MIR7702-201ENST00000621931 59 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 SAMMSON-213ENST00000641336 1521 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 CASC19-255ENST00000641733 1385 ntBASIC5.11□□□□□ -1.59
RFX7Q2KHR2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX7Q2KHR2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 RNA5SP130-201ENST00000364431 114 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 YY1P1-201ENST00000427625 668 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 MRPL50P1-201ENST00000431951 384 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 RPL21P89-201ENST00000444021 467 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 RPL5P32-201ENST00000454085 879 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 SNORA84-201ENST00000459229 133 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 PPM1AP1-201ENST00000502740 1135 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 OR10D4P-201ENST00000525892 951 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 CYP4A43P-201ENST00000568156 121 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC034105.4-201ENST00000568304 277 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AC064801.1-201ENST00000612025 407 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AL596275.2-204ENST00000641628 552 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 AL596275.2-206ENST00000641957 626 ntBASIC5.1□□□□□ -1.59
RFX7Q2KHR2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX7Q2KHR2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 MAPK10-349ENST00000641767 3661 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms