Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.53□□□□□ -1.52
COL16A1Q07092 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.53□□□□□ -1.52
COL16A1Q07092 AL645927.2-201ENST00000618350 349 ntBASIC5.53□□□□□ -1.52
COL16A1Q07092 SCARNA15.3-201ENST00000626315 122 ntBASIC5.53□□□□□ -1.52
COL16A1Q07092 SCARNA4.1-201ENST00000628597 123 ntBASIC5.53□□□□□ -1.52
COL16A1Q07092 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL16A1Q07092 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.53□□□□□ -1.52
COL16A1Q07092 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.53□□□□□ -1.52
COL16A1Q07092 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL16A1Q07092 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL16A1Q07092 AP004289.2-201ENST00000444413 1457 ntBASIC5.53□□□□□ -1.52
COL16A1Q07092 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL16A1Q07092 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.53□□□□□ -1.52
COL16A1Q07092 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL16A1Q07092 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL16A1Q07092 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.53□□□□□ -1.52
COL16A1Q07092 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL16A1Q07092 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.52□□□□□ -1.53
COL16A1Q07092 VN1R51P-201ENST00000411675 945 ntBASIC5.52□□□□□ -1.53
COL16A1Q07092 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 RPL5P24-201ENST00000463742 885 ntBASIC5.52□□□□□ -1.53
COL16A1Q07092 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.52□□□□□ -1.53
COL16A1Q07092 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.52□□□□□ -1.53
COL16A1Q07092 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 AC109446.4-201ENST00000623235 2755 ntBASIC5.52□□□□□ -1.53
COL16A1Q07092 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.52□□□□□ -1.53
COL16A1Q07092 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.52□□□□□ -1.53
COL16A1Q07092 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.52□□□□□ -1.53
COL16A1Q07092 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL16A1Q07092 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.52□□□□□ -1.53
COL16A1Q07092 AF001550.2-201ENST00000636643 217 ntBASIC5.52□□□□□ -1.53
COL16A1Q07092 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.52□□□□□ -1.53
COL16A1Q07092 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COL16A1Q07092 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.51□□□□□ -1.53
COL16A1Q07092 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.51□□□□□ -1.53
COL16A1Q07092 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.51□□□□□ -1.53
COL16A1Q07092 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL16A1Q07092 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL16A1Q07092 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.51□□□□□ -1.53
COL16A1Q07092 RNU11-201ENST00000387069 134 ntBASIC5.51□□□□□ -1.53
COL16A1Q07092 AL358472.1-201ENST00000431295 329 ntBASIC5.51□□□□□ -1.53
COL16A1Q07092 AL133162.1-201ENST00000463228 453 ntBASIC5.51□□□□□ -1.53
COL16A1Q07092 RPS3AP6-201ENST00000484430 795 ntBASIC5.51□□□□□ -1.53
COL16A1Q07092 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.51□□□□□ -1.53
COL16A1Q07092 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.51□□□□□ -1.53
COL16A1Q07092 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
COL16A1Q07092 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.51□□□□□ -1.53
COL16A1Q07092 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.51□□□□□ -1.53
COL16A1Q07092 AL360012.1-201ENST00000602813 131 ntBASIC5.51□□□□□ -1.53
COL16A1Q07092 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.51□□□□□ -1.53
COL16A1Q07092 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.51□□□□□ -1.53
COL16A1Q07092 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL16A1Q07092 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL16A1Q07092 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL16A1Q07092 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL16A1Q07092 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL16A1Q07092 SNORA60-201ENST00000362396 134 ntBASIC5.5□□□□□ -1.53
COL16A1Q07092 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL16A1Q07092 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.5□□□□□ -1.53
COL16A1Q07092 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL16A1Q07092 MTND6P6-201ENST00000478031 263 ntBASIC5.5□□□□□ -1.53
COL16A1Q07092 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.5□□□□□ -1.53
COL16A1Q07092 NDUFA5P2-201ENST00000519723 344 ntBASIC5.5□□□□□ -1.53
COL16A1Q07092 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL16A1Q07092 AC007458.1-201ENST00000542812 373 ntBASIC5.5□□□□□ -1.53
COL16A1Q07092 AC127024.5-201ENST00000580085 462 ntBASIC5.5□□□□□ -1.53
COL16A1Q07092 AC010680.3-201ENST00000604215 520 ntBASIC5.5□□□□□ -1.53
COL16A1Q07092 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL16A1Q07092 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL16A1Q07092 SNX18P3-202ENST00000565670 1750 ntBASIC5.5□□□□□ -1.53
COL16A1Q07092 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL16A1Q07092 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL16A1Q07092 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.49□□□□□ -1.53
COL16A1Q07092 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL16A1Q07092 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL16A1Q07092 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL16A1Q07092 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.49□□□□□ -1.53
COL16A1Q07092 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms