Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC112498.1-201ENST00000444401 332 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC108463.1-201ENST00000450258 347 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 OR6C72P-201ENST00000451403 892 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 MTCYBP14-201ENST00000457471 715 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 RN7SL172P-201ENST00000460535 303 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 OR52A4P-201ENST00000472867 958 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC079841.1-201ENST00000481228 950 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 IGHV3-32-201ENST00000519182 355 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 MIR4458-201ENST00000578872 75 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 MIR4644-201ENST00000579929 84 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC083899.3-201ENST00000603413 594 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC012213.4-201ENST00000606457 354 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 Z98200.1-201ENST00000607298 470 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 AP003392.5-201ENST00000607857 415 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 MIR6778-201ENST00000617912 73 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 MIR1910-201ENST00000636955 80 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 MTCO1P14-201ENST00000441695 1559 ntBASIC3.8□□□□□ -1.8
HLA-DMAP28067 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DMAP28067 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DMAP28067 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC103591.2-201ENST00000265259 766 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 RPL23P2-201ENST00000320371 421 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 MIR1286-201ENST00000408112 78 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 RN7SKP267-201ENST00000410381 285 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 RN7SKP177-201ENST00000410567 355 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 CHEK2P3-201ENST00000416118 248 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 NPM1P24-201ENST00000428039 894 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AL121776.1-201ENST00000429337 372 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 RPS26P40-201ENST00000435209 294 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AL391987.1-201ENST00000441025 200 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC005229.2-201ENST00000456995 399 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 RPL21P71-201ENST00000465598 459 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC104763.1-201ENST00000475274 360 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 RPL36AP41-201ENST00000493820 306 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 RN7SKP66-201ENST00000516681 231 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 IGKV2-18-201ENST00000522607 343 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 GCSHP4-201ENST00000538792 439 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC079171.1-201ENST00000568788 914 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 CPHL1P-201ENST00000461341 3407 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 A2MP1-204ENST00000566278 4130 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC053481.2-202ENST00000582394 1500 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC100871.1-201ENST00000507871 1456 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
HLA-DMAP28067 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMAP28067 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms