Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 AL935212.3-201ENST00000450729 284 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 RPL35AP28-201ENST00000459730 331 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.21□□□□□ -1.74
SFTPBP07988 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 SNORA26.10-201ENST00000516427 141 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 RN7SKP260-201ENST00000516907 149 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 HIGD1AP5-201ENST00000529959 259 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 PCNPP1-201ENST00000552501 511 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.21□□□□□ -1.74
SFTPBP07988 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 CYCSP40-201ENST00000575927 294 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 MIR4691-201ENST00000583764 85 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 EIF1P5-201ENST00000585002 234 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 PCNAP1-202ENST00000595299 752 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.21□□□□□ -1.74
SFTPBP07988 EIF3FP1-201ENST00000613970 806 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 MIR8084-201ENST00000614105 89 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 AC100827.5-201ENST00000615883 426 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 AC006213.5-201ENST00000619673 288 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 THAP12P4-201ENST00000528321 2266 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SFTPBP07988 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.21□□□□□ -1.74
SFTPBP07988 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SFTPBP07988 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.21□□□□□ -1.74
SFTPBP07988 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.21□□□□□ -1.74
SFTPBP07988 AC009643.2-201ENST00000603543 1448 ntBASIC4.21□□□□□ -1.74
SFTPBP07988 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 ECM1P2-201ENST00000503354 1577 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.2□□□□□ -1.74
SFTPBP07988 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.2□□□□□ -1.74
SFTPBP07988 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SFTPBP07988 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SFTPBP07988 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 RNU6-543P-201ENST00000362576 108 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 RNU6-481P-201ENST00000384194 107 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 SNORA66-201ENST00000384792 133 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SFTPBP07988 SNORA40.4-201ENST00000390971 128 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SFTPBP07988 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SFTPBP07988 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 AL109941.1-201ENST00000401925 229 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.2□□□□□ -1.74
SFTPBP07988 DDX39BP1-205ENST00000422507 192 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.2□□□□□ -1.74
SFTPBP07988 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.2□□□□□ -1.74
SFTPBP07988 ELOCP11-201ENST00000436690 332 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 ELOCP16-201ENST00000444494 332 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 RPL7P55-201ENST00000450522 746 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 IFNWP4-201ENST00000453148 294 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.2□□□□□ -1.74
SFTPBP07988 AC010683.1-201ENST00000473673 378 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.2□□□□□ -1.74
SFTPBP07988 AC108043.1-201ENST00000512696 574 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.2□□□□□ -1.74
SFTPBP07988 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.2□□□□□ -1.74
SFTPBP07988 AP001922.4-201ENST00000526967 290 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.2□□□□□ -1.74
SFTPBP07988 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 CR383656.6-201ENST00000550518 394 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 OR4U1P-201ENST00000554958 912 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.2□□□□□ -1.74
SFTPBP07988 AC090751.1-201ENST00000566966 267 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC106734.1-201ENST00000568646 663 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 NF1P5-201ENST00000588287 448 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.2□□□□□ -1.74
SFTPBP07988 AC093765.1-201ENST00000603758 881 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 OR2BH1P-201ENST00000608850 864 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC006946.3-201ENST00000609791 756 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC097505.1-201ENST00000610199 565 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AL627230.1-201ENST00000613077 211 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AL049794.2-201ENST00000616301 365 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AL591926.8-201ENST00000616876 211 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC009704.2-201ENST00000618739 483 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AL353662.3-201ENST00000625131 237 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SFTPBP07988 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SFTPBP07988 MAPK10-304ENST00000641341 3984 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 USP9YP4-201ENST00000424401 1745 ntBASIC4.2□□□□□ -1.74
SFTPBP07988 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.2□□□□□ -1.74
SFTPBP07988 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.2□□□□□ -1.74
SFTPBP07988 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SFTPBP07988 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SFTPBP07988 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms