Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC016542.1-201ENST00000608259 493 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC055764.2-201ENST00000610089 670 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 FAM27B-201ENST00000610601 213 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC123768.4-201ENST00000616244 701 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MT-ND1P03886 AL442639.1-201ENST00000625030 1899 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
MT-ND1P03886 NCLP2-201ENST00000416078 1462 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.3□□□□□ -1.72
MT-ND1P03886 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
MT-ND1P03886 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
MT-ND1P03886 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 SNORA74A-201ENST00000364089 198 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MT-ND1P03886 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 MORF4L1P7-201ENST00000426038 703 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 RPS24P8-201ENST00000431490 402 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-ND1P03886 RPL34P26-201ENST00000445636 354 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 TRY2P-201ENST00000448860 689 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AURKAPS2-201ENST00000454983 333 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 RPS5P7-201ENST00000456664 608 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AC090142.1-201ENST00000465776 462 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 RPSAP50-201ENST00000481955 852 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC025164.1-201ENST00000496249 478 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC008694.2-201ENST00000517591 306 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-ND1P03886 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-ND1P03886 GCSHP4-201ENST00000538792 439 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-ND1P03886 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC027176.2-201ENST00000559166 746 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.29□□□□□ -1.72
MT-ND1P03886 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC087763.1-201ENST00000603391 286 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AC100847.1-201ENST00000611316 481 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 MIR7973-1-201ENST00000614683 76 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AC025016.1-201ENST00000616746 682 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AC116563.2-201ENST00000624751 535 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 AC097372.4-201ENST00000625025 466 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.29□□□□□ -1.72
MT-ND1P03886 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
MT-ND1P03886 AL049555.1-201ENST00000562834 1933 ntBASIC4.29□□□□□ -1.72
MT-ND1P03886 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MT-ND1P03886 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MT-ND1P03886 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 RNU1-108P-201ENST00000362556 161 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 SNORA51.1-201ENST00000363243 140 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
MT-ND1P03886 RNU1-63P-201ENST00000383902 164 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 AL353692.2-201ENST00000407054 335 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 RPL31P52-201ENST00000407532 367 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 VN1R8P-201ENST00000407739 893 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 PTGES3P2-201ENST00000407942 482 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MT-ND1P03886 RN7SKP213-201ENST00000410746 298 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.28□□□□□ -1.72
MT-ND1P03886 MTND2P21-201ENST00000436242 1042 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 AL031663.1-201ENST00000437445 219 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 CBX1P4-201ENST00000439415 457 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 RPL7P33-201ENST00000444159 742 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 AL935212.3-201ENST00000450729 284 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MT-ND1P03886 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MT-ND1P03886 RPS6P2-201ENST00000454208 705 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 RPS26P28-201ENST00000470806 348 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.28□□□□□ -1.72
MT-ND1P03886 AC093763.2-201ENST00000505334 1223 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 MTCO1P31-201ENST00000506355 492 ntBASIC4.28□□□□□ -1.72
MT-ND1P03886 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.28□□□□□ -1.72
MT-ND1P03886 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.28□□□□□ -1.72
MT-ND1P03886 PPBPP1-201ENST00000510807 373 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms