Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC011155.1-201ENST00000316512 456 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 RNA5SP428-201ENST00000365129 132 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 RPL7P27-201ENST00000403775 720 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 HNRNPDP2-201ENST00000406475 478 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 RN7SKP273-201ENST00000411392 314 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 RPL36AP10-201ENST00000421785 322 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC246680.2-201ENST00000422106 389 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 FO393414.1-201ENST00000428697 1184 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC092162.1-201ENST00000432828 434 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC023347.2-201ENST00000433994 462 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 RPS26P40-201ENST00000435209 294 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 DNAJC19P8-201ENST00000452887 259 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC016724.1-201ENST00000453215 421 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 CDC42P1-201ENST00000456658 548 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 RPS26P39-201ENST00000469206 341 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC010374.1-201ENST00000503762 1237 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC093801.2-201ENST00000503966 1050 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 MRPS33P2-201ENST00000507850 322 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC147055.3-201ENST00000510547 851 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 RNA5SP92-201ENST00000516437 110 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 RNA5SP392-201ENST00000516905 112 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 HMGB1P23-201ENST00000518743 568 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC010376.1-201ENST00000522101 334 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC068446.3-201ENST00000555285 382 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC023824.3-201ENST00000569003 562 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 MIR4691-201ENST00000583764 85 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 TAS2R6P-201ENST00000605022 826 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC087783.2-201ENST00000605070 562 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AF129408.1-201ENST00000608767 431 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AC243756.2-201ENST00000618406 463 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 AL590396.4-201ENST00000636779 956 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 LINC01739-205ENST00000641890 573 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SRRM4A7MD48 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 DDX18P5-201ENST00000534547 1306 ntBASIC3.95□□□□□ -1.78
SRRM4A7MD48 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SRRM4A7MD48 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SRRM4A7MD48 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
SRRM4A7MD48 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SRRM4A7MD48 AL031119.1-201ENST00000404707 1879 ntBASIC3.94□□□□□ -1.78
SRRM4A7MD48 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.94□□□□□ -1.78
SRRM4A7MD48 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SRRM4A7MD48 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SRRM4A7MD48 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.94□□□□□ -1.78
SRRM4A7MD48 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SRRM4A7MD48 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SRRM4A7MD48 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms