Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 MIR23A-201ENST00000385245 73 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 MIR1193-201ENST00000408109 78 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC007064.3-201ENST00000422608 359 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 RPL7AP25-201ENST00000423357 805 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 RPL12P28-201ENST00000430852 489 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 NFYAP1-201ENST00000431953 972 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC073143.1-201ENST00000436316 395 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 EIF2S2P2-201ENST00000447161 982 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 APOOP2-201ENST00000461561 539 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC113430.1-201ENST00000506872 718 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 RNU4-18P-201ENST00000516751 149 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC090151.1-201ENST00000520784 730 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC002044.3-201ENST00000623314 541 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC055839.1-201ENST00000634467 498 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 RAD17P1-201ENST00000418130 2042 ntBASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTNNA3Q9UI47 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 ARAFP1-201ENST00000422172 605 ntBASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 RPEP3-201ENST00000425462 676 ntBASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 DDX39BP2-208ENST00000453923 258 ntBASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 AC053481.1-201ENST00000467217 306 ntBASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 RN7SKP21-201ENST00000516503 220 ntBASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 AP001160.4-201ENST00000596971 382 ntBASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 MLECP1-201ENST00000615893 709 ntBASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.32□□□□□ -1.56
CTNNA3Q9UI47 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 RNU1-108P-201ENST00000362556 161 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 Y_RNA.62-201ENST00000362840 99 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 RNA5SP307-201ENST00000362863 116 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 Y_RNA.126-201ENST00000363382 111 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC019155.1-201ENST00000382242 574 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 RNU1-44P-201ENST00000384453 163 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 MIR3065-201ENST00000390137 79 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC073136.2-201ENST00000417282 849 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC004975.1-201ENST00000428733 208 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CDY14P-201ENST00000431260 1014 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CDY12P-201ENST00000440679 1015 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 HMGB3P9-201ENST00000441799 583 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CDY13P-201ENST00000445813 1015 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CDY23P-201ENST00000451661 1014 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 RPS27AP17-201ENST00000463344 455 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CCDC75P1-201ENST00000469247 791 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC012158.1-204ENST00000483430 465 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 UBA52P3-201ENST00000491303 382 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC093840.1-201ENST00000511599 336 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 RPL12P25-202ENST00000598100 674 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC020634.1-201ENST00000608701 549 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 AC012409.3-201ENST00000611343 981 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 MIR6891-201ENST00000618788 93 ntBASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA3Q9UI47 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA3Q9UI47 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CTNNA3Q9UI47 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA3Q9UI47 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA3Q9UI47 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms