Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 CDC27P1-201ENST00000445384 715 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC079804.1-201ENST00000461922 436 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC008694.2-201ENST00000517591 306 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC090151.1-201ENST00000520784 730 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 RN7SL703P-201ENST00000578485 302 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC024941.1-201ENST00000612250 334 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 LINC01109-201ENST00000603837 3081 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC068254.2-201ENST00000623938 3577 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AL356967.1-201ENST00000406305 431 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AL450992.3-201ENST00000413192 568 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 RPL23AP38-201ENST00000423801 469 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 OR7E10P-201ENST00000526420 991 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 RNA5SP283-201ENST00000365604 119 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 SNORA74C-2-201ENST00000411179 201 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 CYCSP19-201ENST00000411715 316 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 RPL10P17-201ENST00000453852 316 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 UQCRHP4-201ENST00000471686 272 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC090589.1-201ENST00000473109 362 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC010374.1-201ENST00000503762 1237 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC099522.1-202ENST00000514718 367 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 RNA5SP519-201ENST00000516480 119 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 NPM1P6-201ENST00000521088 871 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AC138907.10-201ENST00000623708 983 ntBASIC4.04□□□□□ -1.76
CCDC88CQ9P219 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 MFSD8-220ENST00000641243 1422 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AC099654.3-201ENST00000447087 1546 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AL607077.1-201ENST00000401718 499 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 RNA5SP296-201ENST00000410523 111 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 MIR1911-201ENST00000410783 80 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 OR5BE1P-201ENST00000425977 939 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 COX6B1P7-201ENST00000430845 235 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 TMX2P1-201ENST00000436507 708 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AL512326.1-201ENST00000443050 721 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 EIF2S2P5-201ENST00000457635 968 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 RPL35AP15-201ENST00000468042 339 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 RN7SL600P-201ENST00000581811 299 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 OR5BE1P-202ENST00000641168 1176 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AL596275.2-204ENST00000641628 552 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 AL596275.2-206ENST00000641957 626 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC88CQ9P219 MAPK10-253ENST00000641010 4072 ntBASIC4.03□□□□□ -1.76
CCDC88CQ9P219 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
CCDC88CQ9P219 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms