Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC015726.1-201ENST00000602353 681 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC073073.2-201ENST00000609827 2578 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC009229.4-201ENST00000623854 1947 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AL591503.2-201ENST00000442314 1005 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 RPS11P1-201ENST00000451072 473 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC108145.1-201ENST00000503770 153 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC006064.5-201ENST00000541782 248 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AP000648.2-201ENST00000624182 404 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 AC068722.2-201ENST00000618734 544 ntBASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CSMD1Q96PZ7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC007066.1-201ENST00000392902 381 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 RPS7P15-201ENST00000415804 584 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 USP9YP36-201ENST00000424581 829 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 USP9YP31-201ENST00000431405 881 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 RN7SL812P-201ENST00000493791 279 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 DEFB109D-201ENST00000529497 240 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC110743.1-201ENST00000584870 478 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 MIR8058-201ENST00000615737 89 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 MIR7111-201ENST00000619751 72 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 OR6K3-202ENST00000368146 996 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 PTP4A1P3-201ENST00000433661 420 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 RN7SL809P-201ENST00000482040 297 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 RN7SL271P-201ENST00000487601 295 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC006349.1-201ENST00000555526 235 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 CYCSP40-201ENST00000575927 294 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 TTC3P1-201ENST00000399586 6081 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AL035423.1-201ENST00000420331 213 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC092641.1-201ENST00000440229 772 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 CYCSP24-201ENST00000445119 316 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 PRNCR1-201ENST00000635449 12727 ntBASIC3.42□□□□□ -1.86
CSMD1Q96PZ7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 CYCSP4-201ENST00000429682 331 ntBASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 AC006960.3-201ENST00000561845 705 ntBASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 AL160290.3-201ENST00000604869 165 ntBASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 RNU1-30P-201ENST00000606575 163 ntBASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 AC110801.1-201ENST00000623590 212 ntBASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CSMD1Q96PZ7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms