Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF39Q86UA1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 ASNSP1-201ENST00000518311 1939 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC009643.2-201ENST00000603543 1448 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 OR52E6-202ENST00000379946 954 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 CYB5AP4-201ENST00000396692 399 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 RPL31P52-201ENST00000407532 367 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AL158050.1-201ENST00000416077 457 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC008173.1-201ENST00000418901 264 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 MTCO1P43-201ENST00000431831 488 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 MOB1AP2-201ENST00000446060 614 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 RHEBP2-201ENST00000450289 600 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 EIF2S2P5-201ENST00000457635 968 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC063943.1-201ENST00000465434 453 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC112206.1-201ENST00000468416 477 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC063949.1-201ENST00000552900 865 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC104229.1-201ENST00000561364 255 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 MIR4270-201ENST00000581799 70 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 RN7SL52P-201ENST00000584271 284 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 AC015911.5-201ENST00000587076 451 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 ADAD1P2-201ENST00000588476 646 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 MIR8084-201ENST00000614105 89 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 RN7SL722P-201ENST00000617780 284 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 RN7SL565P-201ENST00000618246 284 ntBASIC5.01□□□□□ -1.61
PRPF39Q86UA1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF39Q86UA1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AC008432.1-201ENST00000615912 1320 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 NEAT1-202ENST00000501122 22743 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5□□□□□ -1.61
PRPF39Q86UA1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5□□□□□ -1.61
PRPF39Q86UA1 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AC008549.2-201ENST00000333482 706 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AL357515.1-201ENST00000402967 542 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AL158825.1-201ENST00000414735 521 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5□□□□□ -1.61
PRPF39Q86UA1 EIF4A1P1-201ENST00000420241 934 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AC245028.1-201ENST00000423259 256 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 CKS1BP6-201ENST00000424932 240 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AC093422.3-201ENST00000428506 305 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 DYNLL1P7-201ENST00000429273 258 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 ETF1P3-201ENST00000430422 1160 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 ZDHHC20P1-204ENST00000435787 423 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 RPL7P11-201ENST00000437586 658 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5□□□□□ -1.61
PRPF39Q86UA1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5□□□□□ -1.61
PRPF39Q86UA1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5□□□□□ -1.61
PRPF39Q86UA1 RPL37P3-201ENST00000456825 293 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AC006463.2-201ENST00000473326 348 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AC073358.1-201ENST00000505671 684 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5□□□□□ -1.61
PRPF39Q86UA1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms