Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 SCARNA22-201ENST00000503991 125 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 GAPDHP56-201ENST00000506031 988 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.74□□□□□ -1.65
CASQ1P31415 AP001960.1-201ENST00000506494 658 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 RNA5SP362-201ENST00000516048 118 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 RNA5SP309-201ENST00000516670 106 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.74□□□□□ -1.65
CASQ1P31415 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CASQ1P31415 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.74□□□□□ -1.65
CASQ1P31415 AC063949.1-201ENST00000552900 865 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.74□□□□□ -1.65
CASQ1P31415 AC141257.3-201ENST00000572906 215 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC020978.7-201ENST00000575953 1187 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.74□□□□□ -1.65
CASQ1P31415 AC005034.4-201ENST00000603612 899 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC115621.1-201ENST00000604653 858 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC012213.4-201ENST00000606457 354 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 EIF3FP1-201ENST00000613970 806 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC008115.4-201ENST00000619780 775 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC138393.1-206ENST00000540997 1886 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 LINC02471-203ENST00000641941 4752 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASQ1P31415 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASQ1P31415 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CASQ1P31415 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.74□□□□□ -1.65
CASQ1P31415 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CASQ1P31415 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CASQ1P31415 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.74□□□□□ -1.65
CASQ1P31415 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CASQ1P31415 LINC00622-201ENST00000562811 1570 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 AC108467.2-201ENST00000617640 1597 ntBASIC4.74□□□□□ -1.65
CASQ1P31415 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
CASQ1P31415 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CASQ1P31415 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.73□□□□□ -1.65
CASQ1P31415 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CASQ1P31415 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
CASQ1P31415 AL138878.1-201ENST00000405131 347 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 AMZ2P2-201ENST00000406819 1057 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.73□□□□□ -1.65
CASQ1P31415 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.73□□□□□ -1.65
CASQ1P31415 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.73□□□□□ -1.65
CASQ1P31415 AL590806.1-201ENST00000415818 853 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.73□□□□□ -1.65
CASQ1P31415 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.73□□□□□ -1.65
CASQ1P31415 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.73□□□□□ -1.65
CASQ1P31415 HIGD1AP8-201ENST00000453927 274 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.73□□□□□ -1.65
CASQ1P31415 IGLV2-34-201ENST00000490007 283 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 AC012170.1-201ENST00000495139 359 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CASQ1P31415 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.73□□□□□ -1.65
CASQ1P31415 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.73□□□□□ -1.65
CASQ1P31415 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.73□□□□□ -1.65
CASQ1P31415 GCSHP4-201ENST00000538792 439 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.73□□□□□ -1.65
CASQ1P31415 AC105129.1-201ENST00000560250 297 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 AC010680.4-201ENST00000605334 543 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 U3.53-201ENST00000628922 216 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.73□□□□□ -1.65
CASQ1P31415 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.73□□□□□ -1.65
CASQ1P31415 CPHL1P-201ENST00000461341 3407 ntBASIC4.73□□□□□ -1.65
CASQ1P31415 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CASQ1P31415 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.73□□□□□ -1.65
CASQ1P31415 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CASQ1P31415 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CASQ1P31415 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASQ1P31415 AC025125.1-201ENST00000624743 1922 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CASQ1P31415 MIR124-3-201ENST00000384866 87 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CASQ1P31415 OR3A2-201ENST00000408891 1076 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 NPM1P4-201ENST00000414095 812 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 AC092832.1-201ENST00000422934 400 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 GSTA7P-201ENST00000438425 448 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 EXTL2P1-201ENST00000446218 416 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.72□□□□□ -1.65
CASQ1P31415 UBA52P7-201ENST00000486088 380 ntBASIC4.72□□□□□ -1.65
CASQ1P31415 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.72□□□□□ -1.65
CASQ1P31415 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.72□□□□□ -1.65
CASQ1P31415 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.72□□□□□ -1.65
CASQ1P31415 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.72□□□□□ -1.65
CASQ1P31415 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.72□□□□□ -1.65
CASQ1P31415 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASQ1P31415 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CASQ1P31415 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.71□□□□□ -1.65
CASQ1P31415 EXOC5P1-201ENST00000510543 1969 ntBASIC4.71□□□□□ -1.66
CASQ1P31415 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CASQ1P31415 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CASQ1P31415 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CASQ1P31415 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.71□□□□□ -1.66
CASQ1P31415 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CASQ1P31415 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.71□□□□□ -1.66
CASQ1P31415 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.71□□□□□ -1.66
CASQ1P31415 RPS20P14-201ENST00000412545 360 ntBASIC4.71□□□□□ -1.66
CASQ1P31415 CHEK2P3-201ENST00000416118 248 ntBASIC4.71□□□□□ -1.66
CASQ1P31415 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.71□□□□□ -1.66
CASQ1P31415 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.71□□□□□ -1.66
CASQ1P31415 AC092647.1-201ENST00000420654 287 ntBASIC4.71□□□□□ -1.66
CASQ1P31415 AL732292.1-201ENST00000426692 226 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms