Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AURKAPS1-201ENST00000451805 1212 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AL389915.2-201ENST00000454576 441 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 APOOP2-201ENST00000461561 539 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RPL21P71-201ENST00000465598 459 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RN7SL189P-201ENST00000468631 289 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RN7SL814P-201ENST00000487715 300 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 UBA52P3-201ENST00000491303 382 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RPS4XP14-201ENST00000493072 781 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC006499.3-201ENST00000506077 748 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC110760.3-202ENST00000515177 371 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RNA5SP92-201ENST00000516437 110 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC023632.1-201ENST00000518463 375 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 MTND2P32-201ENST00000521584 1038 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.82□□□□□ -1.64
ABCD3P28288 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.82□□□□□ -1.64
ABCD3P28288 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC004217.3-201ENST00000551552 878 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 AC068446.3-201ENST00000555285 382 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC044913.1-201ENST00000557200 430 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.82□□□□□ -1.64
ABCD3P28288 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.82□□□□□ -1.64
ABCD3P28288 RN7SL708P-201ENST00000580952 299 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ABCD3P28288 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ABCD3P28288 MIR4472-2-201ENST00000582069 67 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC017100.2-201ENST00000584628 355 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC011477.5-201ENST00000586571 259 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AL365400.2-201ENST00000605604 902 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AL157392.4-201ENST00000609756 345 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 MIR6839-201ENST00000620425 113 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.82□□□□□ -1.64
ABCD3P28288 AC087821.2-201ENST00000637086 450 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC135068.12-201ENST00000637370 931 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.82□□□□□ -1.64
ABCD3P28288 DDX18P3-201ENST00000404856 2007 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 AC006210.2-201ENST00000367074 1545 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 AC004817.4-201ENST00000602396 3625 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ABCD3P28288 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 BMS1P3-201ENST00000372011 932 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 OR1L6-202ENST00000373684 1044 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ABCD3P28288 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 MIR600-201ENST00000385007 98 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AL021331.1-201ENST00000402817 582 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AL079342.2-201ENST00000403367 482 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 SFR1P1-201ENST00000403720 688 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 NUDT19P3-201ENST00000404698 555 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 RN7SKP126-201ENST00000411143 300 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 SETP15-201ENST00000412724 337 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 EI24P4-201ENST00000423683 1078 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 C1DP1-201ENST00000426049 402 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 MTND6P18-201ENST00000439477 513 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 RPL23AP15-201ENST00000450202 459 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 RN7SL515P-201ENST00000463999 297 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC009127.1-201ENST00000467090 155 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC108729.1-201ENST00000487812 947 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 AC113420.1-201ENST00000507903 571 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 RNU6-488P-201ENST00000515918 99 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC022790.1-201ENST00000522872 204 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 AC074029.1-201ENST00000552531 1044 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AL390334.1-201ENST00000556395 450 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.81□□□□□ -1.64
ABCD3P28288 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms