Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC9.37□□□□□ -0.91
CHGAP10645 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
CHGAP10645 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CHGAP10645 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC9.36□□□□□ -0.91
CHGAP10645 AC011592.1-201ENST00000624647 3634 ntBASIC9.36□□□□□ -0.91
CHGAP10645 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC9.36□□□□□ -0.91
CHGAP10645 MTND5P3-201ENST00000438536 1800 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC9.36□□□□□ -0.91
CHGAP10645 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC9.36□□□□□ -0.91
CHGAP10645 RNA5SP510-201ENST00000364697 99 ntBASIC9.36□□□□□ -0.91
CHGAP10645 RNU6-359P-201ENST00000365466 108 ntBASIC9.36□□□□□ -0.91
CHGAP10645 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CHGAP10645 SNORA69-201ENST00000383895 132 ntBASIC9.36□□□□□ -0.91
CHGAP10645 RNU6-510P-201ENST00000391239 108 ntBASIC9.36□□□□□ -0.91
CHGAP10645 RPL23AP32-201ENST00000395315 459 ntBASIC9.36□□□□□ -0.91
CHGAP10645 HMGN1P20-201ENST00000411849 300 ntBASIC9.36□□□□□ -0.91
CHGAP10645 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
CHGAP10645 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC9.36□□□□□ -0.91
CHGAP10645 HIGD1AP8-201ENST00000453927 274 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 RPL21P71-201ENST00000465598 459 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 AC026826.1-201ENST00000493002 361 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AC022206.1-201ENST00000495947 347 ntBASIC9.36□□□□□ -0.91
CHGAP10645 SSX8-201ENST00000506270 579 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 RN7SKP116-201ENST00000516902 319 ntBASIC9.36□□□□□ -0.91
CHGAP10645 IGKV3D-25-201ENST00000519599 235 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 AC036111.2-201ENST00000533247 901 ntBASIC9.36□□□□□ -0.91
CHGAP10645 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC9.36□□□□□ -0.91
CHGAP10645 AC106785.4-201ENST00000569492 412 ntBASIC9.36□□□□□ -0.91
CHGAP10645 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC9.36□□□□□ -0.91
CHGAP10645 SNORA70D-201ENST00000578836 135 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AC022884.3-201ENST00000579571 248 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AC008507.3-201ENST00000585753 472 ntBASIC9.36□□□□□ -0.91
CHGAP10645 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.36□□□□□ -0.91
CHGAP10645 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC9.36□□□□□ -0.91
CHGAP10645 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC9.36□□□□□ -0.91
CHGAP10645 RNU6-84P-201ENST00000607737 102 ntBASIC9.36□□□□□ -0.91
CHGAP10645 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC9.36□□□□□ -0.91
CHGAP10645 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CHGAP10645 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC9.36□□□□□ -0.91
CHGAP10645 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC9.36□□□□□ -0.91
CHGAP10645 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHGAP10645 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHGAP10645 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CHGAP10645 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
CHGAP10645 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC9.35□□□□□ -0.91
CHGAP10645 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHGAP10645 ERCC6-202ENST00000374127 1782 ntBASIC9.35□□□□□ -0.91
CHGAP10645 AC107021.2-201ENST00000567714 2095 ntBASIC9.35□□□□□ -0.91
CHGAP10645 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHGAP10645 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC9.35□□□□□ -0.91
CHGAP10645 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CHGAP10645 Y_RNA.132-201ENST00000363421 102 ntBASIC9.35□□□□□ -0.91
CHGAP10645 Y_RNA.144-201ENST00000363521 113 ntBASIC9.35□□□□□ -0.91
CHGAP10645 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
CHGAP10645 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC9.35□□□□□ -0.91
CHGAP10645 SNORA75.4-201ENST00000391278 119 ntBASIC9.35□□□□□ -0.91
CHGAP10645 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC9.35□□□□□ -0.91
CHGAP10645 TXNP7-201ENST00000406296 293 ntBASIC9.35□□□□□ -0.91
CHGAP10645 AL357752.1-201ENST00000412817 349 ntBASIC9.35□□□□□ -0.91
CHGAP10645 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC9.35□□□□□ -0.91
CHGAP10645 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC9.35□□□□□ -0.91
CHGAP10645 DUTP4-201ENST00000424782 475 ntBASIC9.35□□□□□ -0.91
CHGAP10645 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC9.35□□□□□ -0.91
CHGAP10645 RPL36AP53-201ENST00000432891 316 ntBASIC9.35□□□□□ -0.91
CHGAP10645 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC9.35□□□□□ -0.91
CHGAP10645 RPL5P25-201ENST00000441148 775 ntBASIC9.35□□□□□ -0.91
CHGAP10645 HLA-DPA3-207ENST00000454398 229 ntBASIC9.35□□□□□ -0.91
CHGAP10645 AC130509.1-201ENST00000464158 433 ntBASIC9.35□□□□□ -0.91
CHGAP10645 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHGAP10645 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC9.35□□□□□ -0.91
CHGAP10645 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC9.35□□□□□ -0.91
CHGAP10645 TRMT10BP1-201ENST00000519377 943 ntBASIC9.35□□□□□ -0.91
CHGAP10645 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC9.35□□□□□ -0.91
CHGAP10645 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC9.35□□□□□ -0.91
CHGAP10645 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms