Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC4P09017 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC4P09017 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC4P09017 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXC4P09017 RNA5SP28-201ENST00000363841 119 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC4P09017 OR51A6P-201ENST00000418680 1004 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 GTF2IP2-201ENST00000424290 697 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 RPL21P133-201ENST00000443666 476 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 NUTF2P3-201ENST00000448540 384 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 HSPE1P22-201ENST00000456856 327 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 AC103987.1-201ENST00000473394 348 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 AC068587.1-201ENST00000483613 781 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 RN7SL691P-201ENST00000494487 301 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC4P09017 PPM1AP1-201ENST00000502740 1135 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC4P09017 AC010374.1-201ENST00000503762 1237 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 AL592156.1-201ENST00000508758 304 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC4P09017 PARP4P3-201ENST00000510265 317 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC4P09017 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXC4P09017 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXC4P09017 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC4P09017 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.31□□□□□ -1.72
HOXC4P09017 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HOXC4P09017 AC010201.1-201ENST00000605051 540 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC4P09017 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HOXC4P09017 AL139254.3-201ENST00000641097 674 ntBASIC4.31□□□□□ -1.72
HOXC4P09017 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC4P09017 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC4P09017 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC4P09017 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HOXC4P09017 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXC4P09017 AL356317.1-201ENST00000396110 1436 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 MTND4P26-201ENST00000415971 1359 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HOXC4P09017 AL356489.2-201ENST00000566968 3528 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 RNU6-697P-201ENST00000363348 107 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 RNA5SP175-201ENST00000364275 119 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AL078604.1-201ENST00000404609 466 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 RNA5SP146-201ENST00000410743 123 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC4P09017 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 EIF1P3-201ENST00000423841 334 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXC4P09017 RPS3AP54-201ENST00000435535 734 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 MTND6P18-201ENST00000439477 513 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC4P09017 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HOXC4P09017 AC041039.1-201ENST00000485656 536 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AC008958.1-201ENST00000511047 682 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 SNORA26.10-201ENST00000516427 141 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 RNA5SP73-201ENST00000516744 108 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AC090151.1-201ENST00000520784 730 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXC4P09017 OR5BC1P-201ENST00000529327 739 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 CYCSP28-201ENST00000534284 321 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 PDCD5P1-201ENST00000543528 309 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC4P09017 MTATP6P25-201ENST00000574491 261 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC4P09017 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXC4P09017 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 AP005212.4-201ENST00000614206 710 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HOXC4P09017 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC4P09017 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 EOGT-210ENST00000615922 1931 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 MAPK10-303ENST00000641324 3959 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 NEAT1-202ENST00000501122 22743 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
HOXC4P09017 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXC4P09017 AP001002.1-201ENST00000625148 1513 ntBASIC4.3□□□□□ -1.72
HOXC4P09017 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC4P09017 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXC4P09017 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HOXC4P09017 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC4P09017 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HOXC4P09017 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 AL158163.1-201ENST00000603915 1649 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms