Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC099670.2-201ENST00000435130 321 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AC073052.1-201ENST00000440417 714 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 RPL23AP93-201ENST00000440847 484 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC090804.1-201ENST00000448870 490 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC007688.1-201ENST00000475592 759 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 OR52A4P-202ENST00000481634 799 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AC041039.1-201ENST00000485656 536 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AC090543.1-201ENST00000492168 485 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC087272.1-201ENST00000523624 533 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFBP01127 AL049870.4-201ENST00000555741 486 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.75□□□□□ -1.65
PDGFBP01127 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFBP01127 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFBP01127 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.75□□□□□ -1.65
PDGFBP01127 AGGF1P6-201ENST00000569213 976 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFBP01127 AL133247.2-201ENST00000603236 482 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AL391834.1-201ENST00000609609 560 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 AL354696.1-201ENST00000614652 497 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PDGFBP01127 Z95331.1-201ENST00000623075 23112 ntBASIC4.75□□□□□ -1.65
PDGFBP01127 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
PDGFBP01127 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PDGFBP01127 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFBP01127 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFBP01127 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFBP01127 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFBP01127 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 MAPK10-328ENST00000641553 4009 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFBP01127 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFBP01127 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDGFBP01127 RNU4-31P-201ENST00000384211 141 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 U3.32-201ENST00000408116 212 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 CYCSP19-201ENST00000411715 316 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFBP01127 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFBP01127 RPL7AP49-201ENST00000429522 581 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 TRIM60P13-201ENST00000432350 1283 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 AL591438.1-201ENST00000433508 581 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 MTND2P40-201ENST00000436718 841 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFBP01127 AC016772.1-201ENST00000444170 1261 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFBP01127 AL513343.1-201ENST00000451818 792 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 SCARNA10-201ENST00000459255 330 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 UBA52P3-201ENST00000491303 382 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 AC005912.1-201ENST00000495392 255 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 RN7SL558P-201ENST00000497468 299 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFBP01127 SNRPGP1-201ENST00000553864 222 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.74□□□□□ -1.65
PDGFBP01127 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFBP01127 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFBP01127 uc_338.9-201ENST00000617424 182 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFBP01127 AL118496.1-201ENST00000440201 1812 ntBASIC4.74□□□□□ -1.65
PDGFBP01127 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFBP01127 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFBP01127 MAPK10-304ENST00000641341 3984 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PDGFBP01127 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 RN7SKP185-201ENST00000362813 326 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 RNA5SP366-201ENST00000365454 123 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 RNU6-146P-201ENST00000384602 108 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDGFBP01127 OR51B3P-201ENST00000412287 913 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.73□□□□□ -1.65
PDGFBP01127 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.73□□□□□ -1.65
PDGFBP01127 DPY19L1P2-201ENST00000426647 915 ntBASIC4.73□□□□□ -1.65
PDGFBP01127 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.73□□□□□ -1.65
PDGFBP01127 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.73□□□□□ -1.65
PDGFBP01127 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms