Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.14□□□□□ -1.43
HFM1A2PYH4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
HFM1A2PYH4 AC068993.1-201ENST00000546724 589 ntBASIC6.14□□□□□ -1.43
HFM1A2PYH4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
HFM1A2PYH4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.14□□□□□ -1.43
HFM1A2PYH4 AGGF1P6-201ENST00000569213 976 ntBASIC6.14□□□□□ -1.43
HFM1A2PYH4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.14□□□□□ -1.43
HFM1A2PYH4 AC015922.4-201ENST00000612568 690 ntBASIC6.14□□□□□ -1.43
HFM1A2PYH4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
HFM1A2PYH4 MIR7702-201ENST00000621931 59 ntBASIC6.14□□□□□ -1.43
HFM1A2PYH4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HFM1A2PYH4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 AC090220.1-201ENST00000593078 1699 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 SNORA70.4-201ENST00000365509 134 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 SNORA11C-201ENST00000408532 129 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 AP000357.1-201ENST00000409926 1165 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 RN7SKP202-201ENST00000410439 330 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 AC108032.1-201ENST00000416706 207 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 AL358472.1-201ENST00000431295 329 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 RN7SL132P-201ENST00000478131 296 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 AL356863.1-201ENST00000623378 1080 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 AC112484.5-201ENST00000624189 228 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 AP005264.7-201ENST00000625003 745 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 CASC19-261ENST00000641853 1638 ntBASIC6.13□□□□□ -1.43
HFM1A2PYH4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HFM1A2PYH4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.13□□□□□ -1.43
HFM1A2PYH4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HFM1A2PYH4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HFM1A2PYH4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HFM1A2PYH4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HFM1A2PYH4 Z95327.2-201ENST00000414579 1873 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HFM1A2PYH4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HFM1A2PYH4 RNA5SP513-201ENST00000364648 118 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HFM1A2PYH4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.12□□□□□ -1.43
HFM1A2PYH4 RPL38P1-201ENST00000460914 211 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 AC091959.2-201ENST00000477363 321 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 YPEL5P3-201ENST00000547227 352 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.12□□□□□ -1.43
HFM1A2PYH4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.12□□□□□ -1.43
HFM1A2PYH4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.12□□□□□ -1.43
HFM1A2PYH4 AC010487.1-201ENST00000594408 1172 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 MIR432-201ENST00000606207 94 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 AL121890.2-201ENST00000617644 465 ntBASIC6.12□□□□□ -1.43
HFM1A2PYH4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
HFM1A2PYH4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HFM1A2PYH4 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.11□□□□□ -1.43
HFM1A2PYH4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HFM1A2PYH4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
HFM1A2PYH4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.11□□□□□ -1.43
HFM1A2PYH4 TBCAP1-201ENST00000436520 327 ntBASIC6.11□□□□□ -1.43
HFM1A2PYH4 RPS4XP4-201ENST00000443195 763 ntBASIC6.11□□□□□ -1.43
HFM1A2PYH4 AC023632.4-201ENST00000517783 191 ntBASIC6.11□□□□□ -1.43
HFM1A2PYH4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.11□□□□□ -1.43
HFM1A2PYH4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.11□□□□□ -1.43
HFM1A2PYH4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HFM1A2PYH4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HFM1A2PYH4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HFM1A2PYH4 AC006517.1-201ENST00000480485 328 ntBASIC6.1□□□□□ -1.43
HFM1A2PYH4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HFM1A2PYH4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HFM1A2PYH4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 AC053481.4-201ENST00000583164 216 ntBASIC6.1□□□□□ -1.43
HFM1A2PYH4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HFM1A2PYH4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms