Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 VENTXP5-201ENST00000523979 775 ntBASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 AL136038.3-201ENST00000561909 1096 ntBASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 CLEC4GP1-201ENST00000596555 870 ntBASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 FEM1AP1-201ENST00000431297 1995 ntBASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC2Q9Y5Z7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 AP000523.1-201ENST00000398242 1049 ntBASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 AC112907.2-201ENST00000448639 330 ntBASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.33■□□□□ 0.85
HCFC2Q9Y5Z7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HCFC2Q9Y5Z7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.33■□□□□ 0.84
HCFC2Q9Y5Z7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.33■□□□□ 0.84
HCFC2Q9Y5Z7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HCFC2Q9Y5Z7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HCFC2Q9Y5Z7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 AC026396.1-201ENST00000419388 421 ntBASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 AC083849.1-201ENST00000615227 514 ntBASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.32■□□□□ 0.84
HCFC2Q9Y5Z7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms