Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGB1Q9Y5G3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGB1Q9Y5G3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 Z98044.1-201ENST00000632503 1764 ntBASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 KRT16P6-202ENST00000425692 1426 ntBASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 AC123595.1-201ENST00000440769 1046 ntBASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGB1Q9Y5G3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB1Q9Y5G3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 HLA-L-209ENST00000420110 1011 ntBASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 NTF6G-201ENST00000591094 616 ntBASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB1Q9Y5G3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms