Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 AC120498.9-201ENST00000339021 3867 ntBASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 AP003097.1-201ENST00000530657 1135 ntBASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGB3Q9Y5G1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGB3Q9Y5G1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB3Q9Y5G1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 PRORSD1P-201ENST00000295112 541 ntBASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 AC066615.1-201ENST00000640911 628 ntBASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB3Q9Y5G1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 AC008687.6-201ENST00000596318 630 ntBASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB3Q9Y5G1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB3Q9Y5G1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms