Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 YBX1P10-201ENST00000444752 975 ntBASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 HTR7P1-201ENST00000538670 1336 ntBASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 Z99916.2-201ENST00000604037 246 ntBASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 LINC01023-201ENST00000606054 436 ntBASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPH3AQ9Y2J0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AC009237.14-201ENST00000609975 1594 ntBASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.77■□□□□ 0.44
RPH3AQ9Y2J0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RPH3AQ9Y2J0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms