Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 LINC01465-201ENST00000408887 1940 ntBASIC26.6■■□□□ 1.85
NINLQ9Y2I6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NINLQ9Y2I6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 PRSS44-201ENST00000515154 1146 ntBASIC26.59■■□□□ 1.85
NINLQ9Y2I6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 CKBP1-201ENST00000565489 1086 ntBASIC26.59■■□□□ 1.85
NINLQ9Y2I6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NINLQ9Y2I6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 CCR12P-201ENST00000446203 998 ntBASIC26.58■■□□□ 1.85
NINLQ9Y2I6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 AC010653.2-201ENST00000623505 997 ntBASIC26.58■■□□□ 1.85
NINLQ9Y2I6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
NINLQ9Y2I6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC26.58■■□□□ 1.84
NINLQ9Y2I6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC26.58■■□□□ 1.84
NINLQ9Y2I6 AL023803.3-201ENST00000615559 522 ntBASIC26.58■■□□□ 1.84
NINLQ9Y2I6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.58■■□□□ 1.84
NINLQ9Y2I6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 AC116562.4-202ENST00000641738 218 ntBASIC26.57■■□□□ 1.84
NINLQ9Y2I6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 AC092338.2-201ENST00000568827 1415 ntBASIC26.57■■□□□ 1.84
NINLQ9Y2I6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NINLQ9Y2I6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 HMGA1P5-201ENST00000412453 271 ntBASIC26.56■■□□□ 1.84
NINLQ9Y2I6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
NINLQ9Y2I6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 HIST1H2APS4-201ENST00000362070 348 ntBASIC26.55■■□□□ 1.84
NINLQ9Y2I6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 AL137013.1-201ENST00000432946 1228 ntBASIC26.55■■□□□ 1.84
NINLQ9Y2I6 AC010203.1-204ENST00000548782 407 ntBASIC26.55■■□□□ 1.84
NINLQ9Y2I6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC26.55■■□□□ 1.84
NINLQ9Y2I6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms