Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 SLC7A5P2-201ENST00000553010 536 ntBASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 AC079140.4-201ENST00000507448 529 ntBASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD3Q9UBI1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 KRT8P17-201ENST00000453110 1448 ntBASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 MIR572-201ENST00000384983 95 ntBASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 GUSBP5-201ENST00000418136 578 ntBASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 AL358852.1-201ENST00000623174 1268 ntBASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 AL031598.1-201ENST00000561511 1773 ntBASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD3Q9UBI1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 AC010141.2-201ENST00000452426 721 ntBASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 AL356652.1-201ENST00000615962 565 ntBASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms