Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.26e-8■■■□□ 16.3
DROSHAQ9NRR4 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.246e-8■■■□□ 16.3
DROSHAQ9NRR4 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC13.28□□□□□ -0.286e-8■■■□□ 16.3
DROSHAQ9NRR4 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC12.94□□□□□ -0.346e-8■■■□□ 16.3
DROSHAQ9NRR4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.96■■□□□ 1.592e-6■■■□□ 16.3
DROSHAQ9NRR4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.742e-6■■■□□ 16.3
DROSHAQ9NRR4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.937e-7■■■□□ 16.3
DROSHAQ9NRR4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.47e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC24.2■■□□□ 1.462e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC23.57■■□□□ 1.362e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.342e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC22.92■■□□□ 1.262e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC22.63■■□□□ 1.212e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC22.42■■□□□ 1.182e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC22.42■■□□□ 1.182e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 12e-7■■■□□ 16.3
DROSHAQ9NRR4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC21.06■□□□□ 0.962e-7■■■□□ 16.3
DROSHAQ9NRR4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.39e-7■■■□□ 16.3
DROSHAQ9NRR4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.622e-7■■■□□ 16.3
DROSHAQ9NRR4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.572e-7■■■□□ 16.3
DROSHAQ9NRR4 ATXN2L-211ENST00000563314 4574 ntTSL 517.78■□□□□ 0.442e-7■■■□□ 16.3
DROSHAQ9NRR4 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.362e-7■■■□□ 16.3
DROSHAQ9NRR4 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.352e-7■■■□□ 16.3
DROSHAQ9NRR4 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.352e-7■■■□□ 16.3
DROSHAQ9NRR4 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.352e-7■■■□□ 16.3
DROSHAQ9NRR4 ENO2-207ENST00000537688 547 ntTSL 524.99■■□□□ 1.592e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-210ENST00000539713 543 ntTSL 424.88■■□□□ 1.572e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.122e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-212ENST00000542509 825 ntTSL 521.62■■□□□ 1.052e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.912e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-206ENST00000536199 823 ntTSL 520.53■□□□□ 0.882e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-208ENST00000537838 541 ntTSL 420.44■□□□□ 0.862e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.832e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC19.09■□□□□ 0.652e-13■■■□□ 16.2
DROSHAQ9NRR4 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC17.58■□□□□ 0.412e-13■■■□□ 16.2
DROSHAQ9NRR4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC27.81■■■□□ 2.043e-6■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-207ENST00000461601 2204 ntTSL 233.3■■■□□ 2.926e-7■■■□□ 16.2
DROSHAQ9NRR4 LPAR2-206ENST00000589311 355 ntTSL 427.52■■■□□ 21e-6■■■□□ 16.2
DROSHAQ9NRR4 LPAR2-205ENST00000588461 609 ntTSL 426.52■■□□□ 1.841e-6■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.716e-7■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-206ENST00000441914 2418 ntTSL 1 (best)24.75■■□□□ 1.556e-7■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-205ENST00000440051 641 ntTSL 522.94■■□□□ 1.269e-7■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC21.75■■□□□ 1.076e-7■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-209ENST00000484061 3085 ntTSL 1 (best)21.28■■□□□ 19e-7■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-204ENST00000409825 4739 ntTSL 1 (best)19.29■□□□□ 0.686e-7■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.95■□□□□ 0.466e-7■■■□□ 16.2
DROSHAQ9NRR4 TTC7A-211ENST00000491786 3615 ntTSL 1 (best)16.38■□□□□ 0.219e-7■■■□□ 16.2
DROSHAQ9NRR4 WDR6-214ENST00000488572 610 ntTSL 431.92■■■□□ 2.71e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-213ENST00000473238 568 ntTSL 329.82■■■□□ 2.361e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC28.22■■■□□ 2.111e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-206ENST00000438660 852 ntTSL 528.13■■■□□ 2.091e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-205ENST00000429900 563 ntTSL 526.29■■□□□ 1.81e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-212ENST00000472878 556 ntTSL 525.73■■□□□ 1.711e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-210ENST00000462064 589 ntTSL 524.36■■□□□ 1.491e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-209ENST00000461687 555 ntTSL 423.8■■□□□ 1.41e-9■■■□□ 16.2
DROSHAQ9NRR4 WDR6-203ENST00000419837 538 ntTSL 417.02■□□□□ 0.321e-9■■■□□ 16.2
DROSHAQ9NRR4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.541e-7■■■□□ 16.2
DROSHAQ9NRR4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC29.68■■■□□ 2.348e-7■■■□□ 16.2
DROSHAQ9NRR4 UNKL-206ENST00000402641 669 ntTSL 329.41■■■□□ 2.38e-7■■■□□ 16.2
DROSHAQ9NRR4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.66■□□□□ 0.747e-7■■■□□ 16.2
DROSHAQ9NRR4 UNKL-207ENST00000403703 4281 ntTSL 1 (best)16.99■□□□□ 0.317e-7■■■□□ 16.2
DROSHAQ9NRR4 MHENCR-201ENST00000411579 582 ntTSL 231.23■■■□□ 2.594e-7■■■□□ 16.2
DROSHAQ9NRR4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC27.91■■■□□ 2.064e-7■■■□□ 16.2
DROSHAQ9NRR4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.01□□□□□ -1.612e-6■■■□□ 16.2
DROSHAQ9NRR4 MAEA-204ENST00000503162 2069 ntTSL 222.71■■□□□ 1.233e-6■■■□□ 16.2
DROSHAQ9NRR4 CALM2-207ENST00000484408 682 ntTSL 531.62■■■□□ 2.659e-9■■■□□ 16.2
DROSHAQ9NRR4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.259e-9■■■□□ 16.2
DROSHAQ9NRR4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC27.91■■■□□ 2.069e-9■■■□□ 16.2
DROSHAQ9NRR4 CALM2-208ENST00000489742 522 ntTSL 324.54■■□□□ 1.529e-9■■■□□ 16.2
DROSHAQ9NRR4 CALM2-203ENST00000432899 1004 ntTSL 521.45■■□□□ 1.029e-9■■■□□ 16.2
DROSHAQ9NRR4 STPG4-206ENST00000422269 983 ntTSL 216.49■□□□□ 0.239e-9■■■□□ 16.2
DROSHAQ9NRR4 CALM2-202ENST00000409563 770 ntTSL 5 BASIC15.63■□□□□ 0.099e-9■■■□□ 16.2
DROSHAQ9NRR4 CALM2-204ENST00000456319 703 ntTSL 24.02□□□□□ -1.779e-9■■■□□ 16.2
DROSHAQ9NRR4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC29.42■■■□□ 2.31e-6■■■□□ 16.2
DROSHAQ9NRR4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.511e-6■■■□□ 16.2
DROSHAQ9NRR4 NANS-206ENST00000495319 764 ntTSL 327.82■■■□□ 2.042e-14■■■□□ 16.2
DROSHAQ9NRR4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.92e-14■■■□□ 16.2
DROSHAQ9NRR4 NANS-205ENST00000480925 649 ntTSL 224.31■■□□□ 1.482e-14■■■□□ 16.2
DROSHAQ9NRR4 TMC6-213ENST00000589933 580 ntTSL 332.83■■■□□ 2.856e-8■■■□□ 16.2
DROSHAQ9NRR4 ALDOC-205ENST00000460201 922 ntTSL 221.64■■□□□ 1.063e-7■■■□□ 16.1
DROSHAQ9NRR4 ALDOC-206ENST00000578590 839 ntTSL 416.9■□□□□ 0.33e-7■■■□□ 16.1
DROSHAQ9NRR4 ALDOC-204ENST00000435638 579 ntTSL 315.24■□□□□ 0.033e-7■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-206ENST00000565081 1558 ntTSL 231.06■■■□□ 2.561e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.461e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-204ENST00000563995 589 ntTSL 329.83■■■□□ 2.371e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-SULT1A3-204ENST00000567520 2227 ntTSL 228.71■■■□□ 2.191e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.131e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-SULT1A3-206ENST00000569959 2424 ntTSL 226.69■■□□□ 1.861e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-SULT1A3-201ENST00000561824 1838 ntTSL 226.2■■□□□ 1.781e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-SULT1A3-205ENST00000568997 2834 ntTSL 226.11■■□□□ 1.771e-15■■■□□ 16.1
DROSHAQ9NRR4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC26■■□□□ 1.751e-15■■■□□ 16.1
DROSHAQ9NRR4 PTBP1-209ENST00000586481 578 ntTSL 330.37■■■□□ 2.454e-7■■■□□ 16.1
DROSHAQ9NRR4 PTBP1-214ENST00000589575 749 ntTSL 319.98■□□□□ 0.794e-7■■■□□ 16.1
DROSHAQ9NRR4 PTBP1-216ENST00000590887 642 ntTSL 319.59■□□□□ 0.734e-7■■■□□ 16.1
DROSHAQ9NRR4 DCXR-212ENST00000579842 715 ntTSL 331.15■■■□□ 2.582e-6■■■□□ 16.1
DROSHAQ9NRR4 DCXR-203ENST00000577532 573 ntTSL 313.12□□□□□ -0.312e-6■■■□□ 16.1
DROSHAQ9NRR4 MIR421-201ENST00000365696 85 ntBASIC4.14□□□□□ -1.752e-10■■■□□ 16.1
DROSHAQ9NRR4 KHNYN-204ENST00000556255 2198 ntTSL 216.49■□□□□ 0.239e-8■■■□□ 16.1
DROSHAQ9NRR4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.346e-10■■■□□ 16.1
DROSHAQ9NRR4 SLC6A8-207ENST00000466243 544 ntTSL 220.86■□□□□ 0.933e-8■■■□□ 16.1
Retrieved 100 of 16,331 protein–RNA pairs in 264.5 ms