Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF3Q9NR23 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.48■□□□□ 0.87
GDF3Q9NR23 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.48■□□□□ 0.87
GDF3Q9NR23 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF3Q9NR23 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.48■□□□□ 0.87
GDF3Q9NR23 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDF3Q9NR23 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDF3Q9NR23 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
GDF3Q9NR23 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.48■□□□□ 0.87
GDF3Q9NR23 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GDF3Q9NR23 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.47■□□□□ 0.87
GDF3Q9NR23 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.47■□□□□ 0.87
GDF3Q9NR23 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.47■□□□□ 0.87
GDF3Q9NR23 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.47■□□□□ 0.87
GDF3Q9NR23 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GDF3Q9NR23 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF3Q9NR23 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 AP001271.2-201ENST00000624018 1556 ntBASIC20.46■□□□□ 0.87
GDF3Q9NR23 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 AC087633.2-202ENST00000565166 1439 ntBASIC20.46■□□□□ 0.87
GDF3Q9NR23 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GDF3Q9NR23 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
GDF3Q9NR23 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDF3Q9NR23 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GDF3Q9NR23 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.45■□□□□ 0.86
GDF3Q9NR23 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.45■□□□□ 0.86
GDF3Q9NR23 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GDF3Q9NR23 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDF3Q9NR23 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.45■□□□□ 0.86
GDF3Q9NR23 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
GDF3Q9NR23 AC060766.5-201ENST00000590539 871 ntBASIC20.45■□□□□ 0.86
GDF3Q9NR23 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.45■□□□□ 0.86
GDF3Q9NR23 HLA-B-256ENST00000639848 1089 ntBASIC20.45■□□□□ 0.86
GDF3Q9NR23 AC073648.6-201ENST00000641589 218 ntBASIC20.45■□□□□ 0.86
GDF3Q9NR23 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
GDF3Q9NR23 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
GDF3Q9NR23 KRT8P17-201ENST00000453110 1448 ntBASIC20.44■□□□□ 0.86
GDF3Q9NR23 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GDF3Q9NR23 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.44■□□□□ 0.86
GDF3Q9NR23 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GDF3Q9NR23 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GDF3Q9NR23 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.44■□□□□ 0.86
GDF3Q9NR23 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.44■□□□□ 0.86
GDF3Q9NR23 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GDF3Q9NR23 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDF3Q9NR23 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.43■□□□□ 0.86
GDF3Q9NR23 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GDF3Q9NR23 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms