Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 C1QL1P1-201ENST00000568105 661 ntBASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 AC233702.5-201ENST00000584107 538 ntBASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 Z99916.2-201ENST00000604037 246 ntBASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.36■□□□□ 0.53
PRDM9Q9NQV7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 AP002982.1-201ENST00000492365 877 ntBASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM9Q9NQV7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 PCDHAC2-203ENST00000615316 3011 ntBASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 AF186192.3-201ENST00000583427 947 ntBASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 AL353708.3-201ENST00000610272 989 ntBASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 AL158211.5-201ENST00000623583 2518 ntBASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.34■□□□□ 0.53
PRDM9Q9NQV7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRDM9Q9NQV7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRDM9Q9NQV7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRDM9Q9NQV7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRDM9Q9NQV7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.33■□□□□ 0.53
PRDM9Q9NQV7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.33■□□□□ 0.53
PRDM9Q9NQV7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.33■□□□□ 0.52
PRDM9Q9NQV7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.33■□□□□ 0.52
PRDM9Q9NQV7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRDM9Q9NQV7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRDM9Q9NQV7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.33■□□□□ 0.52
PRDM9Q9NQV7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRDM9Q9NQV7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms