Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 ZNF815P-204ENST00000434898 1737 ntBASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEUROD4Q9HD90 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 POU5F1P3-201ENST00000428824 1078 ntBASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 AC120498.8-201ENST00000614275 531 ntBASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 AL121829.2-201ENST00000620908 328 ntBASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.3■□□□□ 0.52
NEUROD4Q9HD90 AC098818.2-201ENST00000564925 2320 ntBASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 SOX15-203ENST00000570788 1093 ntBASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 AC008687.6-201ENST00000596318 630 ntBASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 LINC01465-201ENST00000408887 1940 ntBASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEUROD4Q9HD90 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEUROD4Q9HD90 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms