Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 AC097658.1-201ENST00000475555 843 ntBASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 AC092368.3-202ENST00000574180 1591 ntBASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 AC093503.3-201ENST00000624917 2352 ntBASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 HLA-B-256ENST00000639848 1089 ntBASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM1Q9HBL6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRTM1Q9HBL6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 TEX21P-204ENST00000641479 1693 ntBASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 AL121906.2-201ENST00000621597 723 ntBASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 MYC-209ENST00000641252 345 ntBASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 AC141586.3-201ENST00000562166 1838 ntBASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 AP006587.1-201ENST00000534129 1502 ntBASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.64■□□□□ 0.57
LRTM1Q9HBL6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 AL161938.1-201ENST00000569833 2180 ntBASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRTM1Q9HBL6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM1Q9HBL6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM1Q9HBL6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM1Q9HBL6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms