Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC096733.2-201ENST00000609937 1394 ntBASIC21.01■□□□□ 0.95
NXF3Q9H4D5 AC005521.1-201ENST00000393351 872 ntBASIC21.01■□□□□ 0.95
NXF3Q9H4D5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 C2orf69P3-201ENST00000565542 1120 ntBASIC21.01■□□□□ 0.95
NXF3Q9H4D5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 AC010331.1-201ENST00000611423 582 ntBASIC21.01■□□□□ 0.95
NXF3Q9H4D5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21■□□□□ 0.95
NXF3Q9H4D5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21■□□□□ 0.95
NXF3Q9H4D5 KRT8P41-201ENST00000533985 1514 ntBASIC21■□□□□ 0.95
NXF3Q9H4D5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 INGX-201ENST00000359239 846 ntBASIC21■□□□□ 0.95
NXF3Q9H4D5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21■□□□□ 0.95
NXF3Q9H4D5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 AC113347.1-201ENST00000413321 391 ntBASIC21■□□□□ 0.95
NXF3Q9H4D5 TMPOP1-202ENST00000424642 1267 ntBASIC21■□□□□ 0.95
NXF3Q9H4D5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21■□□□□ 0.95
NXF3Q9H4D5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
NXF3Q9H4D5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21■□□□□ 0.95
NXF3Q9H4D5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21■□□□□ 0.95
NXF3Q9H4D5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NXF3Q9H4D5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NXF3Q9H4D5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
NXF3Q9H4D5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.99■□□□□ 0.95
NXF3Q9H4D5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 TSPY14P-201ENST00000303979 915 ntBASIC20.99■□□□□ 0.95
NXF3Q9H4D5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 KRT18P57-201ENST00000443599 1254 ntBASIC20.99■□□□□ 0.95
NXF3Q9H4D5 SLC25A3P1-201ENST00000443844 931 ntBASIC20.99■□□□□ 0.95
NXF3Q9H4D5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF3Q9H4D5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.98■□□□□ 0.95
NXF3Q9H4D5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 TERF1P1-201ENST00000311003 1181 ntBASIC20.98■□□□□ 0.95
NXF3Q9H4D5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 EGLN1P1-201ENST00000531623 762 ntBASIC20.98■□□□□ 0.95
NXF3Q9H4D5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NXF3Q9H4D5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 ECEL1P2-202ENST00000465689 757 ntBASIC20.97■□□□□ 0.95
NXF3Q9H4D5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 AC092865.7-201ENST00000641832 219 ntBASIC20.97■□□□□ 0.95
NXF3Q9H4D5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms