Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 AL445675.2-201ENST00000620291 557 ntBASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC8Q9H0W5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 KRT16P1-201ENST00000399124 1418 ntBASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC8Q9H0W5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 AC004980.1-204ENST00000429707 299 ntBASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 TSPY15P-201ENST00000457163 923 ntBASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC8Q9H0W5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC8Q9H0W5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 AC026471.5-201ENST00000615068 467 ntBASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC8Q9H0W5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC8Q9H0W5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms