Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 INGX-201ENST00000359239 846 ntBASIC20.15■□□□□ 0.82
RNF38Q9H0F5 TMPOP1-202ENST00000424642 1267 ntBASIC20.15■□□□□ 0.82
RNF38Q9H0F5 FAM207BP-201ENST00000447172 505 ntBASIC20.15■□□□□ 0.82
RNF38Q9H0F5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.15■□□□□ 0.82
RNF38Q9H0F5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF38Q9H0F5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RNF38Q9H0F5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RNF38Q9H0F5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 TSPY14P-201ENST00000303979 915 ntBASIC20.13■□□□□ 0.81
RNF38Q9H0F5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 ECEL1P2-202ENST00000465689 757 ntBASIC20.13■□□□□ 0.81
RNF38Q9H0F5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 C2orf69P3-201ENST00000565542 1120 ntBASIC20.13■□□□□ 0.81
RNF38Q9H0F5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 AC092865.7-201ENST00000641832 219 ntBASIC20.13■□□□□ 0.81
RNF38Q9H0F5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF38Q9H0F5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 KRT8P41-201ENST00000533985 1514 ntBASIC20.12■□□□□ 0.81
RNF38Q9H0F5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 AC073508.3-201ENST00000619697 1419 ntBASIC20.12■□□□□ 0.81
RNF38Q9H0F5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 AC096733.2-201ENST00000609937 1394 ntBASIC20.12■□□□□ 0.81
RNF38Q9H0F5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 AC113347.1-201ENST00000413321 391 ntBASIC20.12■□□□□ 0.81
RNF38Q9H0F5 MFAP1P1-201ENST00000442257 1255 ntBASIC20.12■□□□□ 0.81
RNF38Q9H0F5 SLC25A3P1-201ENST00000443844 931 ntBASIC20.12■□□□□ 0.81
RNF38Q9H0F5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 EGLN1P1-201ENST00000531623 762 ntBASIC20.12■□□□□ 0.81
RNF38Q9H0F5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms