Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 AL121829.2-201ENST00000620908 328 ntBASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM54Q9BYV2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM54Q9BYV2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.14■□□□□ 0.66
TRIM54Q9BYV2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM54Q9BYV2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM54Q9BYV2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 UNC93B5-201ENST00000530315 699 ntBASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM54Q9BYV2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 RNA5SP413-201ENST00000516373 109 ntBASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 AC120498.9-201ENST00000339021 3867 ntBASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM54Q9BYV2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM54Q9BYV2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms