Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC8Q9BY41 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.33■□□□□ 0.69
HDAC8Q9BY41 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC8Q9BY41 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.33■□□□□ 0.69
HDAC8Q9BY41 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC8Q9BY41 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC8Q9BY41 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 SLC25A1P2-201ENST00000430693 912 ntBASIC19.33■□□□□ 0.68
HDAC8Q9BY41 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 SLC25A3P1-201ENST00000443844 931 ntBASIC19.33■□□□□ 0.68
HDAC8Q9BY41 AC128688.1-201ENST00000487626 519 ntBASIC19.33■□□□□ 0.68
HDAC8Q9BY41 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC8Q9BY41 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 AC112907.3-201ENST00000577781 2400 ntBASIC19.32■□□□□ 0.68
HDAC8Q9BY41 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC8Q9BY41 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 AC005521.1-201ENST00000393351 872 ntBASIC19.31■□□□□ 0.68
HDAC8Q9BY41 TMPOP1-202ENST00000424642 1267 ntBASIC19.31■□□□□ 0.68
HDAC8Q9BY41 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 AC104417.2-201ENST00000562989 1793 ntBASIC19.31■□□□□ 0.68
HDAC8Q9BY41 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 ZNF815P-204ENST00000434898 1737 ntBASIC19.31■□□□□ 0.68
HDAC8Q9BY41 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC8Q9BY41 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 TERF1P1-201ENST00000311003 1181 ntBASIC19.3■□□□□ 0.68
HDAC8Q9BY41 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 MIR1224-201ENST00000408193 85 ntBASIC19.3■□□□□ 0.68
HDAC8Q9BY41 CCR12P-201ENST00000446203 998 ntBASIC19.3■□□□□ 0.68
HDAC8Q9BY41 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 CKBP1-201ENST00000565489 1086 ntBASIC19.3■□□□□ 0.68
HDAC8Q9BY41 RN7SL850P-201ENST00000579959 291 ntBASIC19.3■□□□□ 0.68
HDAC8Q9BY41 AC116562.4-202ENST00000641738 218 ntBASIC19.3■□□□□ 0.68
HDAC8Q9BY41 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC8Q9BY41 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms