Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAF4Q9BUZ4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
TRAF4Q9BUZ4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAF4Q9BUZ4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 AC007613.1-201ENST00000572811 2597 ntBASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 AC120498.8-201ENST00000614275 531 ntBASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 AC121338.2-201ENST00000622535 1744 ntBASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAF4Q9BUZ4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 Z82202.1-201ENST00000623446 1880 ntBASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC120498.9-201ENST00000339021 3867 ntBASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AL390719.1-204ENST00000412397 1219 ntBASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 MTDHP1-201ENST00000605323 784 ntBASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC006557.6-201ENST00000623071 864 ntBASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 FZD10-202ENST00000539839 3282 ntBASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF4Q9BUZ4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms