Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RPS2P52-201ENST00000469610 820 ntBASIC19.41■□□□□ 0.7
CPNE1Q99829 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 AC083906.2-201ENST00000511578 360 ntBASIC19.41■□□□□ 0.7
CPNE1Q99829 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE1Q99829 AC091874.3-201ENST00000512672 1195 ntBASIC19.41■□□□□ 0.7
CPNE1Q99829 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 AC124283.5-201ENST00000624661 1809 ntBASIC19.41■□□□□ 0.7
CPNE1Q99829 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE1Q99829 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE1Q99829 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CPNE1Q99829 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE1Q99829 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE1Q99829 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE1Q99829 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE1Q99829 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE1Q99829 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CPNE1Q99829 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CPNE1Q99829 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE1Q99829 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CPNE1Q99829 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE1Q99829 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE1Q99829 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE1Q99829 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE1Q99829 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.4■□□□□ 0.7
CPNE1Q99829 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CPNE1Q99829 AL138781.2-201ENST00000617896 1843 ntBASIC19.39■□□□□ 0.7
CPNE1Q99829 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CPNE1Q99829 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE1Q99829 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE1Q99829 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE1Q99829 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPNE1Q99829 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE1Q99829 AC006970.2-201ENST00000450065 779 ntBASIC19.39■□□□□ 0.69
CPNE1Q99829 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE1Q99829 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE1Q99829 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE1Q99829 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE1Q99829 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE1Q99829 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CPNE1Q99829 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CPNE1Q99829 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE1Q99829 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE1Q99829 CROCCP3-202ENST00000420820 1947 ntBASIC19.39■□□□□ 0.69
CPNE1Q99829 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPNE1Q99829 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CPNE1Q99829 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CPNE1Q99829 AL049812.1-201ENST00000432563 2267 ntBASIC19.38■□□□□ 0.69
CPNE1Q99829 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.38■□□□□ 0.69
CPNE1Q99829 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.38■□□□□ 0.69
CPNE1Q99829 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.38■□□□□ 0.69
CPNE1Q99829 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE1Q99829 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.38■□□□□ 0.69
CPNE1Q99829 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE1Q99829 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPNE1Q99829 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CPNE1Q99829 AL121906.2-201ENST00000621597 723 ntBASIC19.38■□□□□ 0.69
CPNE1Q99829 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPNE1Q99829 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE1Q99829 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE1Q99829 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CPNE1Q99829 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 AP006587.1-201ENST00000534129 1502 ntBASIC19.37■□□□□ 0.69
CPNE1Q99829 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms