Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.91■□□□□ 0.62
PKP4Q99569 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PKP4Q99569 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PKP4Q99569 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
PKP4Q99569 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PKP4Q99569 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PKP4Q99569 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PKP4Q99569 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 AC007952.6-201ENST00000573168 2673 ntBASIC18.9■□□□□ 0.62
PKP4Q99569 AC003957.1-201ENST00000625108 2673 ntBASIC18.9■□□□□ 0.62
PKP4Q99569 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PKP4Q99569 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PKP4Q99569 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.9■□□□□ 0.62
PKP4Q99569 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 AC142381.4-202ENST00000563973 229 ntBASIC18.9■□□□□ 0.62
PKP4Q99569 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.9■□□□□ 0.62
PKP4Q99569 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PKP4Q99569 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PKP4Q99569 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PKP4Q99569 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP4Q99569 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP4Q99569 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PKP4Q99569 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PKP4Q99569 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PKP4Q99569 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PKP4Q99569 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.89■□□□□ 0.61
PKP4Q99569 C1QL1P1-201ENST00000568105 661 ntBASIC18.89■□□□□ 0.61
PKP4Q99569 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.89■□□□□ 0.61
PKP4Q99569 FAM197Y4-202ENST00000622692 608 ntBASIC18.89■□□□□ 0.61
PKP4Q99569 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.89■□□□□ 0.61
PKP4Q99569 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.89■□□□□ 0.61
PKP4Q99569 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PKP4Q99569 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PKP4Q99569 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP4Q99569 ZNF815P-204ENST00000434898 1737 ntBASIC18.88■□□□□ 0.61
PKP4Q99569 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PKP4Q99569 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.88■□□□□ 0.61
PKP4Q99569 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.88■□□□□ 0.61
PKP4Q99569 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.88■□□□□ 0.61
PKP4Q99569 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.88■□□□□ 0.61
PKP4Q99569 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.88■□□□□ 0.61
PKP4Q99569 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.88■□□□□ 0.61
PKP4Q99569 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.88■□□□□ 0.61
PKP4Q99569 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PKP4Q99569 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PKP4Q99569 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PKP4Q99569 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PKP4Q99569 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms