Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHOX2BQ99453 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHOX2BQ99453 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.64■□□□□ 0.73
PHOX2BQ99453 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PHOX2BQ99453 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.64■□□□□ 0.73
PHOX2BQ99453 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.64■□□□□ 0.73
PHOX2BQ99453 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.64■□□□□ 0.73
PHOX2BQ99453 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 LINC01311-201ENST00000565162 1445 ntBASIC19.64■□□□□ 0.73
PHOX2BQ99453 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHOX2BQ99453 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PHOX2BQ99453 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHOX2BQ99453 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHOX2BQ99453 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHOX2BQ99453 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHOX2BQ99453 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHOX2BQ99453 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHOX2BQ99453 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PHOX2BQ99453 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.62■□□□□ 0.73
PHOX2BQ99453 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 AC026310.3-201ENST00000625186 2373 ntBASIC19.62■□□□□ 0.73
PHOX2BQ99453 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.62■□□□□ 0.73
PHOX2BQ99453 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.62■□□□□ 0.73
PHOX2BQ99453 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.62■□□□□ 0.73
PHOX2BQ99453 AC004951.3-201ENST00000418645 1148 ntBASIC19.62■□□□□ 0.73
PHOX2BQ99453 YBX1P10-201ENST00000444752 975 ntBASIC19.62■□□□□ 0.73
PHOX2BQ99453 MIR3180-1-201ENST00000580374 94 ntBASIC19.62■□□□□ 0.73
PHOX2BQ99453 MIR3180-3-201ENST00000584616 94 ntBASIC19.62■□□□□ 0.73
PHOX2BQ99453 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PHOX2BQ99453 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.62■□□□□ 0.73
PHOX2BQ99453 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHOX2BQ99453 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 SPDYE13P-201ENST00000445314 798 ntBASIC19.61■□□□□ 0.73
PHOX2BQ99453 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHOX2BQ99453 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.61■□□□□ 0.73
PHOX2BQ99453 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHOX2BQ99453 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHOX2BQ99453 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHOX2BQ99453 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHOX2BQ99453 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHOX2BQ99453 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 MIR1233-2-201ENST00000408138 82 ntBASIC19.6■□□□□ 0.73
PHOX2BQ99453 MIR1233-1-201ENST00000408722 82 ntBASIC19.6■□□□□ 0.73
PHOX2BQ99453 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 AL023803.3-201ENST00000615559 522 ntBASIC19.6■□□□□ 0.73
PHOX2BQ99453 AC011298.2-201ENST00000617989 482 ntBASIC19.6■□□□□ 0.73
PHOX2BQ99453 AC131212.4-201ENST00000623606 975 ntBASIC19.6■□□□□ 0.73
PHOX2BQ99453 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms