Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 AC128676.1-201ENST00000454392 318 ntBASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 AC233263.1-201ENST00000578059 224 ntBASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 ITM2C-210ENST00000620962 501 ntBASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.05■□□□□ 0.8
NUDCD1Q96RS6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 AP001271.2-201ENST00000624018 1556 ntBASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
NUDCD1Q96RS6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 TFP1-202ENST00000475455 1573 ntBASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUDCD1Q96RS6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 MTDHP1-201ENST00000605323 784 ntBASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 AC009237.14-201ENST00000609975 1594 ntBASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NUDCD1Q96RS6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD1Q96RS6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD1Q96RS6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD1Q96RS6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD1Q96RS6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD1Q96RS6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD1Q96RS6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUDCD1Q96RS6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUDCD1Q96RS6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms