Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB3IPQ96QF0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 AC136469.2-201ENST00000623944 1028 ntBASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 AC141586.3-201ENST00000562166 1838 ntBASIC18.93■□□□□ 0.62
RAB3IPQ96QF0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 ABALON-201ENST00000629058 1903 ntBASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 SRD5A1P1-201ENST00000442297 786 ntBASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB3IPQ96QF0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IPQ96QF0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IPQ96QF0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms