Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AL023973.1-201ENST00000624619 620 ntBASIC20.67■□□□□ 0.9
ZNF558Q96NG5 AL121956.5-201ENST00000625261 221 ntBASIC20.67■□□□□ 0.9
ZNF558Q96NG5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF558Q96NG5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 AL359075.1-203ENST00000462729 1002 ntBASIC20.65■□□□□ 0.9
ZNF558Q96NG5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 AL441883.1-201ENST00000566170 1045 ntBASIC20.65■□□□□ 0.9
ZNF558Q96NG5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF558Q96NG5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ZNF558Q96NG5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.64■□□□□ 0.89
ZNF558Q96NG5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF558Q96NG5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 AC009237.14-201ENST00000609975 1594 ntBASIC20.63■□□□□ 0.89
ZNF558Q96NG5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.63■□□□□ 0.89
ZNF558Q96NG5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 PCED1CP-201ENST00000419887 785 ntBASIC20.63■□□□□ 0.89
ZNF558Q96NG5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 FAM86EP-206ENST00000510506 987 ntBASIC20.63■□□□□ 0.89
ZNF558Q96NG5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF558Q96NG5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms