Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 AL162412.1-201ENST00000567129 965 ntBASIC16.71■□□□□ 0.27
CMTM3Q96MX0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.71■□□□□ 0.27
CMTM3Q96MX0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CMTM3Q96MX0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CMTM3Q96MX0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CMTM3Q96MX0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CMTM3Q96MX0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 IRX1P1-201ENST00000438849 1838 ntBASIC16.7■□□□□ 0.26
CMTM3Q96MX0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 PBX2P1-201ENST00000493219 1291 ntBASIC16.7■□□□□ 0.26
CMTM3Q96MX0 AC023632.3-201ENST00000521633 145 ntBASIC16.7■□□□□ 0.26
CMTM3Q96MX0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 AL591742.1-201ENST00000604433 565 ntBASIC16.7■□□□□ 0.26
CMTM3Q96MX0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.7■□□□□ 0.26
CMTM3Q96MX0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 ABALON-201ENST00000629058 1903 ntBASIC16.69■□□□□ 0.26
CMTM3Q96MX0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 AC100791.3-201ENST00000617619 330 ntBASIC16.69■□□□□ 0.26
CMTM3Q96MX0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.69■□□□□ 0.26
CMTM3Q96MX0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 AC018470.1-201ENST00000624790 3129 ntBASIC16.68■□□□□ 0.26
CMTM3Q96MX0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms