Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.99■□□□□ 0.95
SNX27Q96L92 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SNX27Q96L92 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX27Q96L92 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 MIR1238-201ENST00000408483 83 ntBASIC20.99■□□□□ 0.95
SNX27Q96L92 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 AL390955.1-201ENST00000428694 934 ntBASIC20.99■□□□□ 0.95
SNX27Q96L92 FITM1-202ENST00000559294 800 ntBASIC20.99■□□□□ 0.95
SNX27Q96L92 AL160286.2-201ENST00000567150 934 ntBASIC20.99■□□□□ 0.95
SNX27Q96L92 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.99■□□□□ 0.95
SNX27Q96L92 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX27Q96L92 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX27Q96L92 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.99■□□□□ 0.95
SNX27Q96L92 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SNX27Q96L92 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX27Q96L92 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX27Q96L92 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX27Q96L92 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNX27Q96L92 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNX27Q96L92 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX27Q96L92 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX27Q96L92 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.98■□□□□ 0.95
SNX27Q96L92 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX27Q96L92 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX27Q96L92 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX27Q96L92 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX27Q96L92 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNX27Q96L92 AC008040.2-201ENST00000461049 708 ntBASIC20.98■□□□□ 0.95
SNX27Q96L92 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.98■□□□□ 0.95
SNX27Q96L92 AC011298.2-201ENST00000617989 482 ntBASIC20.98■□□□□ 0.95
SNX27Q96L92 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.98■□□□□ 0.95
SNX27Q96L92 AC130371.2-201ENST00000619443 611 ntBASIC20.98■□□□□ 0.95
SNX27Q96L92 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.98■□□□□ 0.95
SNX27Q96L92 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SNX27Q96L92 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.98■□□□□ 0.95
SNX27Q96L92 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SNX27Q96L92 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.98■□□□□ 0.95
SNX27Q96L92 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SNX27Q96L92 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SNX27Q96L92 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX27Q96L92 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX27Q96L92 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
SNX27Q96L92 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX27Q96L92 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SNX27Q96L92 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SNX27Q96L92 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX27Q96L92 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 AP000593.1-201ENST00000393668 712 ntBASIC20.97■□□□□ 0.95
SNX27Q96L92 AC004951.3-201ENST00000418645 1148 ntBASIC20.97■□□□□ 0.95
SNX27Q96L92 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.97■□□□□ 0.95
SNX27Q96L92 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX27Q96L92 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SNX27Q96L92 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SNX27Q96L92 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SNX27Q96L92 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SNX27Q96L92 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX27Q96L92 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX27Q96L92 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX27Q96L92 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX27Q96L92 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SNX27Q96L92 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SNX27Q96L92 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX27Q96L92 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SNX27Q96L92 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
SNX27Q96L92 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.96■□□□□ 0.95
SNX27Q96L92 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SNX27Q96L92 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.96■□□□□ 0.95
SNX27Q96L92 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX27Q96L92 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.96■□□□□ 0.95
SNX27Q96L92 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX27Q96L92 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX27Q96L92 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX27Q96L92 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX27Q96L92 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.96■□□□□ 0.95
SNX27Q96L92 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms