Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ITCHQ96J02 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ITCHQ96J02 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
ITCHQ96J02 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ITCHQ96J02 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ITCHQ96J02 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ITCHQ96J02 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.48■□□□□ 0.55
ITCHQ96J02 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ITCHQ96J02 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 AL390719.1-204ENST00000412397 1219 ntBASIC18.48■□□□□ 0.55
ITCHQ96J02 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.48■□□□□ 0.55
ITCHQ96J02 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.48■□□□□ 0.55
ITCHQ96J02 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ITCHQ96J02 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ITCHQ96J02 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.48■□□□□ 0.55
ITCHQ96J02 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.48■□□□□ 0.55
ITCHQ96J02 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ITCHQ96J02 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ITCHQ96J02 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.47■□□□□ 0.55
ITCHQ96J02 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
ITCHQ96J02 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ITCHQ96J02 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ITCHQ96J02 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.47■□□□□ 0.55
ITCHQ96J02 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.47■□□□□ 0.55
ITCHQ96J02 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ITCHQ96J02 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ITCHQ96J02 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ITCHQ96J02 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ITCHQ96J02 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ITCHQ96J02 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ITCHQ96J02 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.46■□□□□ 0.55
ITCHQ96J02 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.46■□□□□ 0.55
ITCHQ96J02 AC004911.1-201ENST00000416316 871 ntBASIC18.46■□□□□ 0.55
ITCHQ96J02 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.46■□□□□ 0.55
ITCHQ96J02 AL162430.1-201ENST00000480705 870 ntBASIC18.46■□□□□ 0.55
ITCHQ96J02 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.46■□□□□ 0.55
ITCHQ96J02 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.46■□□□□ 0.55
ITCHQ96J02 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ITCHQ96J02 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ITCHQ96J02 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.46■□□□□ 0.55
ITCHQ96J02 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ITCHQ96J02 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ITCHQ96J02 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.45■□□□□ 0.54
ITCHQ96J02 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ITCHQ96J02 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.45■□□□□ 0.54
ITCHQ96J02 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ITCHQ96J02 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 MKRN4P-201ENST00000444706 1521 ntBASIC18.45■□□□□ 0.54
ITCHQ96J02 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 AC141586.3-201ENST00000562166 1838 ntBASIC18.45■□□□□ 0.54
ITCHQ96J02 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
ITCHQ96J02 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
ITCHQ96J02 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.45■□□□□ 0.54
ITCHQ96J02 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.45■□□□□ 0.54
ITCHQ96J02 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ITCHQ96J02 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms