Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.82■□□□□ 0.76
RTP4Q96DX8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RTP4Q96DX8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.82■□□□□ 0.76
RTP4Q96DX8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.82■□□□□ 0.76
RTP4Q96DX8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RTP4Q96DX8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 ESRRAP1-201ENST00000400596 1257 ntBASIC19.81■□□□□ 0.76
RTP4Q96DX8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 UNC93B4-201ENST00000505679 747 ntBASIC19.81■□□□□ 0.76
RTP4Q96DX8 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTP4Q96DX8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RTP4Q96DX8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTP4Q96DX8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTP4Q96DX8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTP4Q96DX8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTP4Q96DX8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTP4Q96DX8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTP4Q96DX8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTP4Q96DX8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RTP4Q96DX8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTP4Q96DX8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTP4Q96DX8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTP4Q96DX8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 TUBB8P6-201ENST00000436895 1288 ntBASIC19.79■□□□□ 0.76
RTP4Q96DX8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTP4Q96DX8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTP4Q96DX8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTP4Q96DX8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTP4Q96DX8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.79■□□□□ 0.76
RTP4Q96DX8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 CROCCP3-202ENST00000420820 1947 ntBASIC19.78■□□□□ 0.76
RTP4Q96DX8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 AL049812.1-201ENST00000432563 2267 ntBASIC19.78■□□□□ 0.76
RTP4Q96DX8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.78■□□□□ 0.76
RTP4Q96DX8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTP4Q96DX8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms