Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 BX276092.2-201ENST00000417668 665 ntBASIC17.43■□□□□ 0.38
PTP4A1Q93096 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 TSPY6P-201ENST00000448518 926 ntBASIC17.43■□□□□ 0.38
PTP4A1Q93096 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTP4A1Q93096 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A1Q93096 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 MIPEPP3-201ENST00000412105 444 ntBASIC17.42■□□□□ 0.38
PTP4A1Q93096 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 AC006333.2-201ENST00000607957 2099 ntBASIC17.42■□□□□ 0.38
PTP4A1Q93096 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A1Q93096 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A1Q93096 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A1Q93096 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A1Q93096 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 AL109923.1-201ENST00000618799 583 ntBASIC17.41■□□□□ 0.38
PTP4A1Q93096 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A1Q93096 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A1Q93096 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A1Q93096 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A1Q93096 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A1Q93096 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A1Q93096 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 ZNF815P-204ENST00000434898 1737 ntBASIC17.4■□□□□ 0.38
PTP4A1Q93096 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A1Q93096 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A1Q93096 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.39■□□□□ 0.38
PTP4A1Q93096 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTP4A1Q93096 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTP4A1Q93096 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.39■□□□□ 0.38
PTP4A1Q93096 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A1Q93096 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.39■□□□□ 0.37
PTP4A1Q93096 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms