Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.18■□□□□ 0.66
USP7Q93009 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.18■□□□□ 0.66
USP7Q93009 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.18■□□□□ 0.66
USP7Q93009 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.18■□□□□ 0.66
USP7Q93009 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.18■□□□□ 0.66
USP7Q93009 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP7Q93009 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP7Q93009 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
USP7Q93009 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.17■□□□□ 0.66
USP7Q93009 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.17■□□□□ 0.66
USP7Q93009 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.17■□□□□ 0.66
USP7Q93009 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.17■□□□□ 0.66
USP7Q93009 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP7Q93009 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.17■□□□□ 0.66
USP7Q93009 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.17■□□□□ 0.66
USP7Q93009 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
USP7Q93009 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.17■□□□□ 0.66
USP7Q93009 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.17■□□□□ 0.66
USP7Q93009 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.17■□□□□ 0.66
USP7Q93009 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP7Q93009 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.16■□□□□ 0.66
USP7Q93009 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP7Q93009 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.16■□□□□ 0.66
USP7Q93009 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.16■□□□□ 0.66
USP7Q93009 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.16■□□□□ 0.66
USP7Q93009 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.16■□□□□ 0.66
USP7Q93009 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP7Q93009 AL121829.2-201ENST00000620908 328 ntBASIC19.16■□□□□ 0.66
USP7Q93009 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP7Q93009 AC116562.4-201ENST00000641316 2276 ntBASIC19.16■□□□□ 0.66
USP7Q93009 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP7Q93009 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.15■□□□□ 0.66
USP7Q93009 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.15■□□□□ 0.66
USP7Q93009 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.15■□□□□ 0.66
USP7Q93009 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.15■□□□□ 0.66
USP7Q93009 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.15■□□□□ 0.66
USP7Q93009 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.15■□□□□ 0.66
USP7Q93009 AC023632.3-201ENST00000521633 145 ntBASIC19.15■□□□□ 0.66
USP7Q93009 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
USP7Q93009 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.15■□□□□ 0.66
USP7Q93009 AC026471.5-201ENST00000615068 467 ntBASIC19.15■□□□□ 0.66
USP7Q93009 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.15■□□□□ 0.66
USP7Q93009 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.15■□□□□ 0.66
USP7Q93009 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP7Q93009 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP7Q93009 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
USP7Q93009 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
USP7Q93009 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.14■□□□□ 0.66
USP7Q93009 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP7Q93009 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USP7Q93009 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP7Q93009 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms