Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF139Q8WU17 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RNF139Q8WU17 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF139Q8WU17 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.4■□□□□ 0.86
RNF139Q8WU17 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF139Q8WU17 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF139Q8WU17 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RNF139Q8WU17 KRT8P8-201ENST00000434750 1448 ntBASIC20.4■□□□□ 0.86
RNF139Q8WU17 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF139Q8WU17 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.4■□□□□ 0.86
RNF139Q8WU17 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF139Q8WU17 AC073195.1-201ENST00000607241 877 ntBASIC20.4■□□□□ 0.86
RNF139Q8WU17 AL353708.3-201ENST00000610272 989 ntBASIC20.4■□□□□ 0.86
RNF139Q8WU17 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF139Q8WU17 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF139Q8WU17 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF139Q8WU17 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF139Q8WU17 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
RNF139Q8WU17 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.39■□□□□ 0.85
RNF139Q8WU17 SNORA78-201ENST00000459373 127 ntBASIC20.39■□□□□ 0.85
RNF139Q8WU17 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF139Q8WU17 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF139Q8WU17 AC113410.3-201ENST00000623366 203 ntBASIC20.39■□□□□ 0.85
RNF139Q8WU17 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF139Q8WU17 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF139Q8WU17 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RNF139Q8WU17 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 NIFKP9-201ENST00000419265 221 ntBASIC20.38■□□□□ 0.85
RNF139Q8WU17 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 AL158211.5-201ENST00000623583 2518 ntBASIC20.38■□□□□ 0.85
RNF139Q8WU17 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF139Q8WU17 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF139Q8WU17 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF139Q8WU17 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF139Q8WU17 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms