Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 AC026471.5-201ENST00000615068 467 ntBASIC19.7■□□□□ 0.74
CHD5Q8TDI0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.7■□□□□ 0.74
CHD5Q8TDI0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 AC096733.2-201ENST00000609937 1394 ntBASIC19.69■□□□□ 0.74
CHD5Q8TDI0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 AC131212.4-201ENST00000623606 975 ntBASIC19.69■□□□□ 0.74
CHD5Q8TDI0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 AC079598.2-202ENST00000546624 1451 ntBASIC19.69■□□□□ 0.74
CHD5Q8TDI0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.69■□□□□ 0.74
CHD5Q8TDI0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD5Q8TDI0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 AC004951.3-201ENST00000418645 1148 ntBASIC19.68■□□□□ 0.74
CHD5Q8TDI0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 AC091390.4-202ENST00000476426 537 ntBASIC19.68■□□□□ 0.74
CHD5Q8TDI0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.68■□□□□ 0.74
CHD5Q8TDI0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 UNC93B2-201ENST00000285383 730 ntBASIC19.68■□□□□ 0.74
CHD5Q8TDI0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 TEX21P-204ENST00000641479 1693 ntBASIC19.68■□□□□ 0.74
CHD5Q8TDI0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD5Q8TDI0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 RBM17P1-201ENST00000453646 1190 ntBASIC19.67■□□□□ 0.74
CHD5Q8TDI0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD5Q8TDI0 SDHAP1-207ENST00000440850 2000 ntBASIC19.67■□□□□ 0.74
CHD5Q8TDI0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD5Q8TDI0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms